RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 NOVA1P51513 510 aaKnown RBP7.41□□□□□ -1.22
RFX3-202ENST00000358730 IGSF11Q5DX21 431 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 C9orf135Q5VTT2 229 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 SLC23A3Q6PIS1 610 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 SECTM1Q8WVN6 248 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 TP53RKQ96S44 253 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 IER2Q9BTL4 223 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 WFDC1Q9HC57 220 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 ZDHHC8Q9ULC8 765 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 RCL1Q9Y2P8 373 aaKnown RBP7.41□□□□□ -1.22
RFX3-202ENST00000358730 ZNHIT1O43257 154 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 SEC11BP0C7V7 166 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 P2RY1P47900 373 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 CAMLGP49069 296 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 FHITP49789 147 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 UCP3P55916 312 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 IL13RA2Q14627 380 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 ZNF528Q3MIS6 628 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 AVPI1Q5T686 147 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 DCAF12Q5T6F0 453 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 CDCP2Q5VXM1 449 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 TMEM211Q6ICI0 200 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 UBALD2Q8IYN6 164 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 CPEB3Q8NE35 698 aaKnown RBP7.41□□□□□ -1.22
RFX3-202ENST00000358730 OR56B2PQ8NGI1 322 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 LYPD6BQ8NI32 183 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 RSRP1Q9BUV0 290 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 C1QTNF5Q9BXJ0 243 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 SH3BGRL3Q9H299 93 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 LUZP4Q9P127 313 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 NOSIPQ9Y314 301 aaKnown RBP7.41□□□□□ -1.22
RFX3-202ENST00000358730 TMED3Q9Y3Q3 217 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 KLF2Q9Y5W3 355 aaPredicted RBP7.41□□□□□ -1.22
RFX3-202ENST00000358730 MRPL33O75394 65 aaKnown RBP7.41□□□□□ -1.22
RFX3-202ENST00000358730 PRH1P02810 166 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 CRYBA1P05813 215 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 SPP1P10451 314 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 DAZAP2Q15038 168 aaPredicted RBP7.41□□□□□ -1.22
RFX3-202ENST00000358730 PEA15Q15121 130 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 GPR157Q5UAW9 335 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 ETV3LQ6ZN32 361 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 HSD17B11Q8NBQ5 300 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 C2CD4CQ8TF44 421 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 CT55Q8WUE5 264 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 EXTL1Q92935 676 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 SLAMF9Q96A28 289 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 SPSB4Q96A44 273 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 PRDM14Q9GZV8 571 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 ARV1Q9H2C2 271 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 KPTNQ9Y664 436 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 A0A096LPE4 126 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 C3orf85A0A1B0GTC6 90 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 A0A1W2PPZ6 126 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 MEX3AA1L020 520 aaKnown RBP7.4□□□□□ -1.22
RFX3-202ENST00000358730 C1QL1O75973 258 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 DANCRP0C864 163 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 TDGF1P13385 188 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 BCL3P20749 454 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 AKR1C3P42330 323 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 GFRA1P56159 465 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 NHLH2Q02577 135 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 SRYQ05066 204 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 GNMTQ14749 295 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 SPIN3Q5JUX0 258 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 ZFP82Q8N141 532 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 SUMF1Q8NBK3 374 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 GINS3Q9BRX5 216 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 WDFY4Q6ZS81 3184 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 AHCTF1Q8WYP5 2266 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 ZDBF2Q9HCK1 2354 aa7.4□□□□□ -1.22
RFX3-202ENST00000358730 B4E171 279 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 HSPB6O14558 160 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 MPPED1O15442 326 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 GLAP06280 429 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 CCL2P13500 99 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 SNCAP37840 140 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 TSPAN7P41732 249 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 HAAOP46952 286 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 ASCL1P50553 236 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 GPM6AP51674 278 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 PEAR1Q5VY43 1037 aaPredicted RBP7.4□□□□□ -1.23
RFX3-202ENST00000358730 SPINK14Q6IE38 97 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 DMBX1Q8NFW5 382 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 OR4D5Q8NGN0 318 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 EIF5A2Q9GZV4 153 aaKnown RBP7.4□□□□□ -1.23
RFX3-202ENST00000358730 BIN3Q9NQY0 253 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 SMCO4Q9NRQ5 59 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 SLC7A10Q9NS82 523 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 C19orf12Q9NSK7 152 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 FAM86C1Q9NVL1 165 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 CACFD1Q9UGQ2 172 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 BOKQ9UMX3 212 aaPredicted RBP7.4□□□□□ -1.23
RFX3-202ENST00000358730 LOXL2Q9Y4K0 774 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 MUC3AQ02505 3323 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 PCSK5Q92824 1860 aa7.4□□□□□ -1.23
RFX3-202ENST00000358730 COL6A3P12111 3177 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 MED19A0JLT2 244 aaPredicted RBP7.39□□□□□ -1.23
RFX3-202ENST00000358730 RPL36A-HNRNPH2H7BZ11 118 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 LAMTOR5O43504 91 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 SERPINA7P05543 415 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms