RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 MAS1LP35410 378 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 WDR73Q6P4I2 378 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 ZNF66Q6ZN08 573 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 SSMEM1Q8WWF3 244 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 NEIL1Q96FI4 390 aaPredicted RBP8.69□□□□□ -1.02
CHD3-202ENST00000358181 GEMIN7Q9H840 131 aaKnown RBP8.69□□□□□ -1.02
CHD3-202ENST00000358181 HEXA-AS1Q9H8Q6 139 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 HTR1FP30939 366 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 METAP1P53582 386 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 SLC38A11Q08AI6 406 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 TCEAL1Q15170 157 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 LCN8Q6JVE9 175 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 CFAP161Q6P656 301 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 Q6ZS52 159 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 ZNF429Q86V71 674 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 ZNF768Q9H5H4 540 aaKnown RBP8.69□□□□□ -1.02
CHD3-202ENST00000358181 CLN8Q9UBY8 286 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 SLC45A2Q9UMX9 530 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 E5RGE8 158 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 EDIL3O43854 480 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 LALBAP00709 142 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 COX6CP09669 75 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 CLEC2LP0C7M8 214 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 PSG5Q15238 335 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 ZNF691Q5VV52 312 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 LHX8Q68G74 356 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 MRPL54Q6P161 138 aaKnown RBP8.69□□□□□ -1.02
CHD3-202ENST00000358181 SLC16A11Q8NCK7 471 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 KIR3DX1Q9H7L2 352 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 MMP25Q9NPA2 562 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 PLEKHB1Q9UF11 243 aaPredicted RBP8.69□□□□□ -1.02
CHD3-202ENST00000358181 NSG2Q9Y328 171 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 MRPS16Q9Y3D3 137 aaKnown RBP8.69□□□□□ -1.02
CHD3-202ENST00000358181 GPR45Q9Y5Y3 372 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 LAMA4Q16363 1823 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 DLL1O00548 723 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 TAPBPO15533 448 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 ZNF737O75373 536 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 TCRBP04435 133 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 ZNF688P0C7X2 276 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 HOXC13P31276 330 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 ETV6P41212 452 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 RAB9AP51151 201 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 FCN2Q15485 313 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 B3GNT9Q6UX72 402 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 GBGT1Q8N5D6 347 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 MORN4Q8NDC4 146 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 ATG2BQ96BY7 2078 aa8.69□□□□□ -1.02
CHD3-202ENST00000358181 SFTPCP11686 197 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 ATF1P18846 271 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 FCGR2BP31994 310 aaPredicted RBP8.68□□□□□ -1.02
CHD3-202ENST00000358181 RIGQ13278 110 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 KRTCAP3Q53RY4 240 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 TTC32Q5I0X7 151 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 OR1F12Q8NHA8 337 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 ORAI1Q96D31 301 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 ZNHIT1O43257 154 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 POLR2IP36954 125 aaKnown RBP8.68□□□□□ -1.02
CHD3-202ENST00000358181 C10orf113Q5VZT2 155 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 RNF167Q9H6Y7 350 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 TMED3Q9Y3Q3 217 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 CR2P20023 1033 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 RANP62826 216 aaKnown RBP8.68□□□□□ -1.02
CHD3-202ENST00000358181 RPL18Q07020 188 aaKnown RBP8.68□□□□□ -1.02
CHD3-202ENST00000358181 EVA1AQ9H8M9 152 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 UQCC1Q9NVA1 299 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 NAT8Q9UHE5 227 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 NTN1O95631 604 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 ZNF117Q03924 483 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 CIRBPQ14011 172 aaKnown RBP8.68□□□□□ -1.02
CHD3-202ENST00000358181 AGBL4Q5VU57 503 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 ADAMTSL4Q6UY14 1074 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 OVCH2Q7RTZ1 564 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 RBPMSQ93062 196 aaKnown RBP8.68□□□□□ -1.02
CHD3-202ENST00000358181 GLRX2Q9NS18 164 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 A0A1W2PPC4 97 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 SLC17A2O00624 439 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 RPS4XP62701 263 aaKnown RBP8.68□□□□□ -1.02
CHD3-202ENST00000358181 FZD2Q14332 565 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 IGFBP7Q16270 282 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 TMEM102Q8N9M5 508 aaPredicted RBP8.68□□□□□ -1.02
CHD3-202ENST00000358181 OR52B4Q8NGK2 314 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 TOX2Q96NM4 488 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 TSPAN32Q96QS1 320 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 A0A1B0GUL6 1792 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 TOPAZ1Q8N9V7 1692 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 DIRC3C9JPN6 131 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 GFRA3O60609 400 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 CD1EP15812 388 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 MGMTP16455 207 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 EPHA8P29322 1005 aaPredicted RBP8.68□□□□□ -1.02
CHD3-202ENST00000358181 TMEM177Q53S58 311 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 ZNF774Q6NX45 483 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 PAQR6Q6TCH4 344 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 CBARPQ8N350 705 aaPredicted RBP8.68□□□□□ -1.02
CHD3-202ENST00000358181 CT55Q8WUE5 264 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 C4orf45Q96LM5 186 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 FLVCR2Q9UPI3 526 aa8.68□□□□□ -1.02
CHD3-202ENST00000358181 OR5AC1P0C628 307 aa8.67□□□□□ -1.02
CHD3-202ENST00000358181 GABRB1P18505 474 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms