RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 COL12A1Q99715 3063 aa12.33□□□□□ -0.44
NIPAL3-203ENST00000358028 PLATP00750 562 aa12.33□□□□□ -0.44
NIPAL3-203ENST00000358028 ATF4P18848 351 aaPredicted RBP12.33□□□□□ -0.44
NIPAL3-203ENST00000358028 PI3P19957 117 aa12.33□□□□□ -0.44
NIPAL3-203ENST00000358028 FUT6P51993 359 aa12.33□□□□□ -0.44
NIPAL3-203ENST00000358028 EIF5AL1Q6IS14 154 aaKnown RBP12.33□□□□□ -0.44
NIPAL3-203ENST00000358028 Q6ZS92 163 aa12.33□□□□□ -0.44
NIPAL3-203ENST00000358028 TUSC5Q8IXB3 177 aa12.33□□□□□ -0.44
NIPAL3-203ENST00000358028 OR1S2Q8NGQ3 325 aa12.33□□□□□ -0.44
NIPAL3-203ENST00000358028 SPSB4Q96A44 273 aa12.33□□□□□ -0.44
NIPAL3-203ENST00000358028 C1QTNF5Q9BXJ0 243 aa12.33□□□□□ -0.44
NIPAL3-203ENST00000358028 MS4A7Q9GZW8 240 aaPredicted RBP12.33□□□□□ -0.44
NIPAL3-203ENST00000358028 CALHM2Q9HA72 323 aa12.33□□□□□ -0.44
NIPAL3-203ENST00000358028 SLC7A11Q9UPY5 501 aa12.33□□□□□ -0.44
NIPAL3-203ENST00000358028 MYO7BQ6PIF6 2116 aa12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 RELNP78509 3460 aa12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 IGKV1D-8A0A087WSZ0 117 aa12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 ZNF816-ZNF321PA0A0X1KG74 233 aa12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 ZNF587BE7ETH6 402 aa12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 RPL36A-HNRNPH2H7BZ11 118 aa12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 TNFSF10P50591 281 aa12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 TAF9Q16594 264 aa12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 PLCXD3Q63HM9 321 aa12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 CPEB3Q8NE35 698 aaKnown RBP12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 SAT2Q96F10 170 aaPredicted RBP12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 LRRC46Q96FV0 321 aa12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 OR10C1Q96KK4 312 aa12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 HDHD3Q9BSH5 251 aaPredicted RBP12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 C12orf4Q9NQ89 552 aa12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 ASF1BQ9NVP2 202 aa12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 NECAP2Q9NVZ3 263 aa12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 OR5AC2Q9NZP5 309 aa12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 KLF13Q9Y2Y9 288 aaPredicted RBP12.32□□□□□ -0.44
NIPAL3-203ENST00000358028 IGKV1-12A0A0C4DH73 117 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 CRYM-AS1A6NIL9 109 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 ZNF724A8MTY0 619 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 TRIM77I1YAP6 450 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 MSTNO14793 375 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 NME2P1O60361 137 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 IGKV1D-12P01611 117 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 SP1P08047 785 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 NME2P22392 152 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 PTGER4P35408 488 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 PMELP40967 661 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 MEOX1P50221 254 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 ZNF585AQ6P3V2 769 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 IL34Q6ZMJ4 242 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 MDS2Q8NDY4 140 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 PIGCQ92535 297 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 ZNF2Q9BSG1 426 aaPredicted RBP12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 FAAP24Q9BTP7 215 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 PRRG4Q9BZD6 226 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 SLC5A7Q9GZV3 580 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 RNF122Q9H9V4 155 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 ZC4H2Q9NQZ6 224 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 AK3Q9UIJ7 227 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 NBASA2RRP1 2371 aa12.31□□□□□ -0.44
NIPAL3-203ENST00000358028 TMEM218A2RU14 115 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 IFNA21P01568 189 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 OR5H8P0DN80 308 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 CHATP28329 748 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 RAB32Q13637 225 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 RBM39Q14498 530 aaKnown RBP12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 ZNF169Q14929 603 aaPredicted RBP12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 PRR30Q53SZ7 412 aaPredicted RBP12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 C9orf135Q5VTT2 229 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 DHRS11Q6UWP2 260 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 COLCA1Q6ZS62 124 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 OSR2Q8N2R0 312 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 OR5T2Q8NGG2 359 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 FNDC9Q8TBE3 224 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 BCO1Q9HAY6 547 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 MMP26Q9NRE1 261 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 A0A096LPE4 126 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 A0A1W2PPZ6 126 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 ATG12O94817 140 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 KNG1P01042 644 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 DEFA5Q01523 94 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 PDZK1IP1Q13113 114 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 SMCO1Q147U7 214 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 FAM122CQ6P4D5 195 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 CMSS1Q9BQ75 279 aaKnown RBP12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 SULT4A1Q9BR01 284 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 NKX6-2Q9C056 277 aaPredicted RBP12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 PRR13Q9NZ81 148 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 ZNF581Q9P0T4 197 aa12.3□□□□□ -0.44
NIPAL3-203ENST00000358028 SVILO95425 2214 aa12.29□□□□□ -0.44
NIPAL3-203ENST00000358028 MSGN1A6NI15 193 aa12.29□□□□□ -0.44
NIPAL3-203ENST00000358028 KLRC4-KLRK1H3BQV0 150 aa12.29□□□□□ -0.44
NIPAL3-203ENST00000358028 DNASE2O00115 360 aaPredicted RBP12.29□□□□□ -0.44
NIPAL3-203ENST00000358028 FCGR3AP08637 254 aa12.29□□□□□ -0.44
NIPAL3-203ENST00000358028 HOXB5P09067 269 aa12.29□□□□□ -0.44
NIPAL3-203ENST00000358028 FAM157CP0CG43 387 aa12.29□□□□□ -0.44
NIPAL3-203ENST00000358028 COX5BP10606 129 aa12.29□□□□□ -0.44
NIPAL3-203ENST00000358028 FOXG1P55316 489 aaPredicted RBP12.29□□□□□ -0.44
NIPAL3-203ENST00000358028 IAH1Q2TAA2 248 aaPredicted RBP12.29□□□□□ -0.44
NIPAL3-203ENST00000358028 PIGYQ3MUY2 71 aa12.29□□□□□ -0.44
NIPAL3-203ENST00000358028 NAXEQ8NCW5 288 aa12.29□□□□□ -0.44
NIPAL3-203ENST00000358028 TMED6Q8WW62 240 aa12.29□□□□□ -0.44
NIPAL3-203ENST00000358028 APH1AQ96BI3 265 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms