RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 CNOT1A5YKK6 2376 aaKnown RBP13.59□□□□□ -0.23
PTPRO-202ENST00000348962 MPV17LQ2QL34 196 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 TMUB1Q9BVT8 246 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 COA4Q9NYJ1 87 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 CACNG5Q9UF02 275 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 SLC45A2Q9UMX9 530 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 ARID1AO14497 2285 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 SEMA7AO75326 666 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 ZNF205O95201 554 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 EIF4EBP2Q13542 120 aaPredicted RBP13.59□□□□□ -0.23
PTPRO-202ENST00000348962 ANGPTL4Q9BY76 406 aa13.59□□□□□ -0.23
PTPRO-202ENST00000348962 MS4A7Q9GZW8 240 aaPredicted RBP13.59□□□□□ -0.23
PTPRO-202ENST00000348962 MRPS18BQ9Y676 258 aaKnown RBP13.59□□□□□ -0.23
PTPRO-202ENST00000348962 MS4A18H0YCH9 400 aa13.58□□□□□ -0.23
PTPRO-202ENST00000348962 SLC31A2O15432 143 aa13.58□□□□□ -0.23
PTPRO-202ENST00000348962 FAM3AP98173 230 aa13.58□□□□□ -0.23
PTPRO-202ENST00000348962 SLC38A11Q08AI6 406 aa13.58□□□□□ -0.23
PTPRO-202ENST00000348962 PLPPR5Q32ZL2 321 aa13.58□□□□□ -0.23
PTPRO-202ENST00000348962 MS4A18Q3C1V0 323 aa13.58□□□□□ -0.23
PTPRO-202ENST00000348962 ADAM5Q6NVV9 412 aa13.58□□□□□ -0.23
PTPRO-202ENST00000348962 ZNF788Q6ZQV5 615 aa13.58□□□□□ -0.23
PTPRO-202ENST00000348962 WDR61Q9GZS3 305 aaKnown RBP13.58□□□□□ -0.23
PTPRO-202ENST00000348962 LPAR2Q9HBW0 351 aa13.58□□□□□ -0.23
PTPRO-202ENST00000348962 MSL2Q9HCI7 577 aa13.58□□□□□ -0.23
PTPRO-202ENST00000348962 NDUFB6O95139 128 aa13.58□□□□□ -0.24
PTPRO-202ENST00000348962 C1QAP02745 245 aa13.58□□□□□ -0.24
PTPRO-202ENST00000348962 TIAL1Q01085 375 aaKnown RBP eCLIP13.58□□□□□ -0.24
PTPRO-202ENST00000348962 NAA60Q9H7X0 242 aa13.58□□□□□ -0.24
PTPRO-202ENST00000348962 ZNF320A2RRD8 509 aa13.58□□□□□ -0.24
PTPRO-202ENST00000348962 TRDCB7Z8K6 153 aa13.58□□□□□ -0.24
PTPRO-202ENST00000348962 PDGFAP04085 211 aa13.58□□□□□ -0.24
PTPRO-202ENST00000348962 PAX5Q02548 391 aa13.58□□□□□ -0.24
PTPRO-202ENST00000348962 CXorf58Q96LI9 332 aa13.58□□□□□ -0.24
PTPRO-202ENST00000348962 RAB18Q9NP72 206 aa13.58□□□□□ -0.24
PTPRO-202ENST00000348962 FUCA1P04066 466 aa13.58□□□□□ -0.24
PTPRO-202ENST00000348962 CADM3Q8N126 398 aa13.58□□□□□ -0.24
PTPRO-202ENST00000348962 OR52B4Q8NGK2 314 aa13.58□□□□□ -0.24
PTPRO-202ENST00000348962 ZCCHC14Q8WYQ9 949 aaKnown RBP13.58□□□□□ -0.24
PTPRO-202ENST00000348962 STRCP1A6NGW2 1772 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 ARPC4-TTLL3A0A0A6YYG9 625 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 SPP1P10451 314 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 BAK1Q16611 211 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 SPNS3Q6ZMD2 512 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 RNF133Q8WVZ7 376 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 ZNF385AQ96PM9 386 aaKnown RBP13.57□□□□□ -0.24
PTPRO-202ENST00000348962 TMPRSS13Q9BYE2 586 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 CASP8AP2Q9UKL3 1982 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 NUP214P35658 2090 aaPredicted RBP13.57□□□□□ -0.24
PTPRO-202ENST00000348962 SFT2D2O95562 160 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 OR1L4Q8NGR5 311 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 WNT2BQ93097 391 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 OR2C1O95371 312 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 IGHA1P01876 353 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 PLAC9Q5JTB6 97 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 PECRQ9BY49 303 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 GAR1Q9NY12 217 aaKnown RBP13.57□□□□□ -0.24
PTPRO-202ENST00000348962 NPTNQ9Y639 398 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 HS3ST3B1Q9Y662 390 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 TRIP12Q14669 1992 aaPredicted RBP13.57□□□□□ -0.24
PTPRO-202ENST00000348962 CTSSP25774 331 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 DTX4Q9Y2E6 619 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 CCL27Q9Y4X3 112 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 FER1L6Q2WGJ9 1857 aa13.57□□□□□ -0.24
PTPRO-202ENST00000348962 DCTN6O00399 190 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 GNG7O60262 68 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 GABRA6Q16445 453 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 NCR3LG1Q68D85 454 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 GLDNQ6ZMI3 551 aaPredicted RBP13.56□□□□□ -0.24
PTPRO-202ENST00000348962 TGIF2Q9GZN2 237 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 OR1A1Q9P1Q5 309 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 PILRAQ9UKJ1 303 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 SF3B6Q9Y3B4 125 aaKnown RBP13.56□□□□□ -0.24
PTPRO-202ENST00000348962 OPN1MWP04001 364 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 OPN1MW2P0DN77 364 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 OPN1MW3P0DN78 364 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 DMKNQ6E0U4 476 aaPredicted RBP13.56□□□□□ -0.24
PTPRO-202ENST00000348962 OR2J1Q9GZK6 312 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 CEP250Q9BV73 2442 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 CRYBB2P43320 205 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 MMP16P51512 607 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 FAM27BQ5VT28 67 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 C14orf79Q96F83 325 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 PCGF1Q9BSM1 259 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 ANXA10Q9UJ72 324 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 GOLT1BQ9Y3E0 138 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 TGOLN2O43493 480 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 ONECUT2O95948 504 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 PTHLHP12272 177 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 RPL31P62899 125 aaKnown RBP13.56□□□□□ -0.24
PTPRO-202ENST00000348962 CCL8P80075 99 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 KCNMB1Q16558 191 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 FHL5Q5TD97 284 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 CCDC190Q86UF4 302 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 PIPOXQ9P0Z9 390 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 ZMIZ1Q9ULJ6 1067 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 SHANK3Q9BYB0 1731 aa13.56□□□□□ -0.24
PTPRO-202ENST00000348962 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.56□□□□□ -0.24
PTPRO-202ENST00000348962 ZNF883P0CG24 379 aa13.55□□□□□ -0.24
PTPRO-202ENST00000348962 GGTLC2Q14390 218 aa13.55□□□□□ -0.24
PTPRO-202ENST00000348962 R3HDM4Q96D70 268 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms