RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 LPAR3Q9UBY5 353 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 PADI1Q9ULC6 663 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 COL12A1Q99715 3063 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 CHD3Q12873 2000 aaKnown RBP5.19□□□□□ -1.58
CLCN3-201ENST00000347613 A0A087WZY1 265 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 FAM166BA8MTA8 275 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 K7EPK0 472 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 SYNGR1O43759 233 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 EIF3GO75821 320 aaKnown RBP eCLIP5.19□□□□□ -1.58
CLCN3-201ENST00000347613 H2AFB1P0C5Y9 115 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 TMEM11P17152 192 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 CPT2P23786 658 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 GNRHRP30968 328 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 MAGEA5P43359 124 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 CCL20P78556 96 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 AIMP2Q13155 320 aaKnown RBP5.19□□□□□ -1.58
CLCN3-201ENST00000347613 RAB35Q15286 201 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 RSU1Q15404 277 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 PEAR1Q5VY43 1037 aaPredicted RBP5.19□□□□□ -1.58
CLCN3-201ENST00000347613 SLC25A26Q70HW3 274 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 WDR5BQ86VZ2 330 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 C17orf78Q8N4C9 275 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 FAM71E2Q8N5Q1 922 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 UBALD1Q8TB05 177 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 C2CD4CQ8TF44 421 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 C18orf12Q96KH6 178 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 RHOFQ9HBH0 211 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 SLC2A9Q9NRM0 540 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 IL17BQ9UHF5 180 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 TUBD1Q9UJT1 453 aa5.19□□□□□ -1.58
CLCN3-201ENST00000347613 PURGQ9UJV8 347 aaKnown RBP5.19□□□□□ -1.58
CLCN3-201ENST00000347613 A0A0G2JRQ6 117 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 A0A1W2PR80 420 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 C19orf67A6NJJ6 358 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 SERPINE3A8MV23 424 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 EIF1BO60739 113 aaKnown RBP5.18□□□□□ -1.58
CLCN3-201ENST00000347613 CST2P09228 141 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 TPT1P13693 172 aaKnown RBP5.18□□□□□ -1.58
CLCN3-201ENST00000347613 COL8A2P25067 703 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 RPL12P30050 165 aaKnown RBP5.18□□□□□ -1.58
CLCN3-201ENST00000347613 SRD5A2P31213 254 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 FOLR3P41439 243 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 LHX2P50458 406 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 EXT1Q16394 746 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 RNFT1Q5M7Z0 435 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 NUFIP2Q7Z417 695 aaKnown RBP5.18□□□□□ -1.58
CLCN3-201ENST00000347613 HDDC2Q7Z4H3 204 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 ZNF295-AS1Q8N0V1 137 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 ZNF611Q8N823 705 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 SUMF1Q8NBK3 374 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 FNDC9Q8TBE3 224 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 SECTM1Q8WVN6 248 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 IP6K3Q96PC2 410 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 CMSS1Q9BQ75 279 aaKnown RBP5.18□□□□□ -1.58
CLCN3-201ENST00000347613 NRIP2Q9BQI9 281 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 C11orf1Q9H5F2 150 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 TAF9BQ9HBM6 251 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 PARPBPQ9NWS1 579 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 RCC2Q9P258 522 aaKnown RBP5.18□□□□□ -1.58
CLCN3-201ENST00000347613 HSF4Q9ULV5 492 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 MSRB2Q9Y3D2 182 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 SESN1Q9Y6P5 492 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 F8W036 122 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 RRP8O43159 456 aaKnown RBP5.18□□□□□ -1.58
CLCN3-201ENST00000347613 TNFSF12O43508 249 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 TLX3O43711 291 aaPredicted RBP5.18□□□□□ -1.58
CLCN3-201ENST00000347613 RHBDL1O75783 438 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 GDF1P27539 372 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 RBP2P50120 134 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 GPM6AP51674 278 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 CLDN18P56856 261 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 BLOC1S1P78537 153 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 ARF1P84077 181 aaKnown RBP5.18□□□□□ -1.58
CLCN3-201ENST00000347613 C21orf62-AS1Q17RA5 79 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 ZNF818PQ6ZRF7 136 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 SLC35G3Q8N808 338 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 CLRN3Q8NCR9 226 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 TMEM171Q8WVE6 324 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 RTN4IP1Q8WWV3 396 aaPredicted RBP5.18□□□□□ -1.58
CLCN3-201ENST00000347613 PIGMQ9H3S5 423 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 CALHM2Q9HA72 323 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 GLRX2Q9NS18 164 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 STARD10Q9Y365 291 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 A0A1W2PPE3 182 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 NDUFA2O43678 99 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 NME2P1O60361 137 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 MED6O75586 246 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 CD5P06127 495 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 CTSDP07339 412 aaPredicted RBP5.18□□□□□ -1.58
CLCN3-201ENST00000347613 CD80P33681 288 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 KCNJ3P48549 501 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 TAS2R31P59538 309 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 OR8B8Q15620 311 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 ZNF528Q3MIS6 628 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 CXorf66Q5JRM2 361 aaPredicted RBP5.18□□□□□ -1.58
CLCN3-201ENST00000347613 LINC00696Q6ZRV3 163 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 OSR2Q8N2R0 312 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 ZNF565Q8N9K5 539 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 OR56B2PQ8NGI1 322 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 OR2V1Q8NHB1 315 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms