RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 PLA2G2EQ9NZK7 142 aa13.27□□□□□ -0.29
UPF3B-202ENST00000345865 PRSS50Q9UI38 385 aa13.27□□□□□ -0.29
UPF3B-202ENST00000345865 RAB19A4D1S5 217 aa13.26□□□□□ -0.29
UPF3B-202ENST00000345865 NME2P1O60361 137 aa13.26□□□□□ -0.29
UPF3B-202ENST00000345865 ADCYAP1P18509 176 aa13.26□□□□□ -0.29
UPF3B-202ENST00000345865 NME2P22392 152 aa13.26□□□□□ -0.29
UPF3B-202ENST00000345865 RPL12P30050 165 aaKnown RBP13.26□□□□□ -0.29
UPF3B-202ENST00000345865 DEFA5Q01523 94 aa13.26□□□□□ -0.29
UPF3B-202ENST00000345865 ESPL1Q14674 2120 aa13.26□□□□□ -0.29
UPF3B-202ENST00000345865 ABCA11PQ4W5N1 156 aa13.26□□□□□ -0.29
UPF3B-202ENST00000345865 SPERTQ8NA61 448 aa13.26□□□□□ -0.29
UPF3B-202ENST00000345865 OR4A4PQ8NGN8 299 aa13.26□□□□□ -0.29
UPF3B-202ENST00000345865 LHFPL5Q8TAF8 219 aa13.26□□□□□ -0.29
UPF3B-202ENST00000345865 MSI2Q96DH6 328 aaKnown RBP13.26□□□□□ -0.29
UPF3B-202ENST00000345865 LSM5Q9Y4Y9 91 aaKnown RBP13.26□□□□□ -0.29
UPF3B-202ENST00000345865 TRIM77I1YAP6 450 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 ABCD4O14678 606 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 IFNA21P01568 189 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 MBPP02686 304 aaPredicted RBP13.25□□□□□ -0.29
UPF3B-202ENST00000345865 COX5BP10606 129 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 CEACAM21Q3KPI0 293 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 CLEC9AQ6UXN8 241 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 MRPL21Q7Z2W9 205 aaKnown RBP13.25□□□□□ -0.29
UPF3B-202ENST00000345865 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.25□□□□□ -0.29
UPF3B-202ENST00000345865 EXTL1Q92935 676 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 APOBEC3DQ96AK3 386 aaPredicted RBP13.25□□□□□ -0.29
UPF3B-202ENST00000345865 LOXL4Q96JB6 756 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 PRRX2Q99811 253 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 RNF122Q9H9V4 155 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 PCDHB16Q9NRJ7 776 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 KCNIP3Q9Y2W7 256 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 AMDHD2Q9Y303 409 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 ZNF732B4DXR9 585 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 LRP3O75074 770 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 SCGB1D2O95969 90 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 RNFT1Q5M7Z0 435 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 WNT2BQ93097 391 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 BSCL2Q96G97 398 aaPredicted RBP13.25□□□□□ -0.29
UPF3B-202ENST00000345865 C18orf12Q96KH6 178 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 DEFB127Q9H1M4 99 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 C12orf49Q9H741 205 aa13.25□□□□□ -0.29
UPF3B-202ENST00000345865 TMEM218A2RU14 115 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 ZNF705EA8MWA4 302 aaPredicted RBP13.24□□□□□ -0.29
UPF3B-202ENST00000345865 K7EPK0 472 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 DNASE2O00115 360 aaPredicted RBP13.24□□□□□ -0.29
UPF3B-202ENST00000345865 IL18BPO95998 194 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 CST4P01036 141 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 ATF4P18848 351 aaPredicted RBP13.24□□□□□ -0.29
UPF3B-202ENST00000345865 DUSP1P28562 367 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 WNT5AP41221 380 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 TGIF1Q15583 401 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 IGFBP7Q16270 282 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 HIKESHIQ53FT3 197 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 UQCC3Q6UW78 93 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 LIAT1Q6ZQX7 453 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 ZDHHC23Q8IYP9 409 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 FAM71E2Q8N5Q1 922 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 LRTM2Q8N967 370 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 TP53RKQ96S44 253 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 RSRP1Q9BUV0 290 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 TAF9BQ9HBM6 251 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 LPAR3Q9UBY5 353 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 FBXL17Q9UF56 701 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 FAM74A7A6NL05 159 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 HSPB6O14558 160 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 SYNGR1O43759 233 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 DIRAS3O95661 229 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 PPYP01298 95 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 PMELP40967 661 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 UCP3P55916 312 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 TMEM33P57088 247 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 FGF12P61328 243 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 FAM74A3Q4VXF1 159 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 TMEM268Q5VZI3 342 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 CCDC36Q8IYA8 594 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 OR5T2Q8NGG2 359 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 OR52M1Q8NGK5 317 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 ERGIC1Q969X5 290 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 SMIM3Q9BZL3 60 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 OR51B6Q9H340 312 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 MED12LQ86YW9 2145 aa13.24□□□□□ -0.29
UPF3B-202ENST00000345865 H7C1Q1 480 aa13.23□□□□□ -0.29
UPF3B-202ENST00000345865 SLC10A1Q14973 349 aa13.23□□□□□ -0.29
UPF3B-202ENST00000345865 RNPS1Q15287 305 aaKnown RBP13.23□□□□□ -0.29
UPF3B-202ENST00000345865 ZFP62Q8NB50 900 aaPredicted RBP13.23□□□□□ -0.29
UPF3B-202ENST00000345865 ZNF488Q96MN9 340 aa13.23□□□□□ -0.29
UPF3B-202ENST00000345865 SUCNR1Q9BXA5 334 aa13.23□□□□□ -0.29
UPF3B-202ENST00000345865 ZC4H2Q9NQZ6 224 aa13.23□□□□□ -0.29
UPF3B-202ENST00000345865 KLF13Q9Y2Y9 288 aaPredicted RBP13.23□□□□□ -0.29
UPF3B-202ENST00000345865 CD300LBA8K4G0 201 aa13.23□□□□□ -0.29
UPF3B-202ENST00000345865 GPR31O00270 319 aa13.23□□□□□ -0.29
UPF3B-202ENST00000345865 TAAR5O14804 337 aa13.23□□□□□ -0.29
UPF3B-202ENST00000345865 NAPSAO96009 420 aa13.23□□□□□ -0.29
UPF3B-202ENST00000345865 SCTP09683 121 aa13.23□□□□□ -0.29
UPF3B-202ENST00000345865 GNRHRP30968 328 aa13.23□□□□□ -0.29
UPF3B-202ENST00000345865 ARR3P36575 388 aa13.23□□□□□ -0.29
UPF3B-202ENST00000345865 HERPUD1Q15011 391 aa13.23□□□□□ -0.29
UPF3B-202ENST00000345865 TSC22D1Q15714 1073 aa13.23□□□□□ -0.29
UPF3B-202ENST00000345865 VASH2Q86V25 355 aa13.23□□□□□ -0.29
UPF3B-202ENST00000345865 IL22RA1Q8N6P7 574 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms