RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 CHCHD6Q9BRQ6 235 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 MRI1Q9BV20 369 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 PPIL3Q9H2H8 161 aaKnown RBP9.84□□□□□ -0.83
SNCA-202ENST00000345009 GSX1Q9H4S2 264 aaPredicted RBP9.84□□□□□ -0.83
SNCA-202ENST00000345009 TMEM160Q9NX00 188 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 TXNL4BQ9NX01 149 aaKnown RBP9.84□□□□□ -0.83
SNCA-202ENST00000345009 ZNF222Q9UK12 451 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 V9GY05 133 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 NAV3Q8IVL0 2385 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 TRBV23-1A0A0A0MS06 115 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 KIR2DS1A0A191URI9 304 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 K7N7A8 449 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 ZNF44P15621 663 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 RAB3BP20337 219 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 SERPINA2P20848 420 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 GABRR1P24046 479 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 DUSP1P28562 367 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 SEC61A1P61619 476 aaKnown RBP9.83□□□□□ -0.84
SNCA-202ENST00000345009 COL10A1Q03692 680 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 SCN1BQ07699 218 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 IL13RA2Q14627 380 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 RAB11BQ15907 218 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 DGUOKQ16854 277 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 C1orf100Q5SVJ3 147 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 CRIP3Q6Q6R5 217 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 BTN2A1Q7KYR7 527 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 GDPD3Q7L5L3 318 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 RNF144BQ7Z419 303 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 C1QL2Q7Z5L3 287 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 CMTM4Q8IZR5 234 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 CD177Q8N6Q3 437 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 ZNRF1Q8ND25 227 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 OR51T1Q8NGJ9 327 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 H1FXQ92522 213 aaKnown RBP9.83□□□□□ -0.84
SNCA-202ENST00000345009 SNX22Q96L94 193 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 NUDT16L1Q9BRJ7 211 aaKnown RBP9.83□□□□□ -0.84
SNCA-202ENST00000345009 SHARPINQ9H0F6 387 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 C7orf69Q9H7B7 122 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 SPACA1Q9HBV2 294 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 CTSZQ9UBR2 303 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 LPAR3Q9UBY5 353 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 CDC42EP3Q9UKI2 254 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 ST3GAL6Q9Y274 331 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 AK6Q9Y3D8 172 aaKnown RBP9.83□□□□□ -0.84
SNCA-202ENST00000345009 MAB21L2Q9Y586 359 aa9.83□□□□□ -0.84
SNCA-202ENST00000345009 SETD2Q9BYW2 2564 aaPredicted RBP9.83□□□□□ -0.84
SNCA-202ENST00000345009 NSD1Q96L73 2696 aaPredicted RBP9.83□□□□□ -0.84
SNCA-202ENST00000345009 IGHV2-70DA0A0C4DH43 119 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 hCG_1809904A0A1W2PP81 198 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 A0A1W2PPE2 198 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 A0A1W2PR64 198 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 A0A1W2PRV1 198 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 KIAA1324LA8MWY0 1029 aaPredicted RBP9.82□□□□□ -0.84
SNCA-202ENST00000345009 SLC17A2O00624 439 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 SLC22A1O15245 554 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 AIREO43918 545 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 CRTAPO75718 401 aaPredicted RBP9.82□□□□□ -0.84
SNCA-202ENST00000345009 BPNT1O95861 308 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 TK1P04183 234 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 CALCBP10092 127 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 CD37P11049 281 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 ADRA2CP18825 462 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 GADD45AP24522 165 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 SNU13P55769 128 aaKnown RBP9.82□□□□□ -0.84
SNCA-202ENST00000345009 KRTAP1-1Q07627 177 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 SCGB2A2Q13296 93 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 FAM189A2Q15884 450 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 MPV17LQ2QL34 196 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 NHLRC3Q5JS37 347 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 OR10K1Q8NGX5 313 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 KCNG3Q8TAE7 436 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 BEX2Q9BXY8 128 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 OR51E2Q9H255 320 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 SCOCQ9UIL1 159 aa9.82□□□□□ -0.84
SNCA-202ENST00000345009 RPUSD1Q9UJJ7 312 aaKnown RBP9.82□□□□□ -0.84
SNCA-202ENST00000345009 A0A1W2PQ09 198 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 MGST3O14880 152 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 OR7C1O76099 320 aaPredicted RBP9.81□□□□□ -0.84
SNCA-202ENST00000345009 OR2H2O95918 312 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 PPIAL4GP0DN37 164 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 ARSBP15848 533 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 AMY2BP19961 511 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 LMO1P25800 156 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 SRP14P37108 136 aaKnown RBP9.81□□□□□ -0.84
SNCA-202ENST00000345009 KCNJ3P48549 501 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 RBM11P57052 281 aaKnown RBP9.81□□□□□ -0.84
SNCA-202ENST00000345009 RPL31P62899 125 aaKnown RBP9.81□□□□□ -0.84
SNCA-202ENST00000345009 BLMHQ13867 455 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 GRK1Q15835 563 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 CR1LQ2VPA4 569 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 METTL11BQ5VVY1 283 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 Q71RC1 249 aaPredicted RBP9.81□□□□□ -0.84
SNCA-202ENST00000345009 GPR141Q7Z602 305 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 LYPD6Q86Y78 171 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 CROCCP3Q8IVE0 287 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 OR8H2Q8N162 312 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 OR4D6Q8NGJ1 314 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 YIPF6Q96EC8 236 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 DCTN5Q9BTE1 182 aa9.81□□□□□ -0.84
SNCA-202ENST00000345009 BARHL1Q9BZE3 327 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms