RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 ASF1BQ9NVP2 202 aa12.91□□□□□ -0.34
TPM3-208ENST00000341485 CRIM1Q9NZV1 1036 aa12.91□□□□□ -0.34
TPM3-208ENST00000341485 DNAJB11Q9UBS4 358 aa12.91□□□□□ -0.34
TPM3-208ENST00000341485 RPL36A-HNRNPH2H7BZ11 118 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 RBM11P57052 281 aaKnown RBP12.9□□□□□ -0.34
TPM3-208ENST00000341485 TBR1Q16650 682 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 IAH1Q2TAA2 248 aaPredicted RBP12.9□□□□□ -0.34
TPM3-208ENST00000341485 SLC22A25Q6T423 547 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 BATF2Q8N1L9 274 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 TOMM40LQ969M1 308 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 MRPL24Q96A35 216 aaKnown RBP12.9□□□□□ -0.34
TPM3-208ENST00000341485 SLC5A7Q9GZV3 580 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 FGF23Q9GZV9 251 aaPredicted RBP12.9□□□□□ -0.34
TPM3-208ENST00000341485 TMEM100Q9NV29 134 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 LUZP4Q9P127 313 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 MEMO1Q9Y316 297 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 CELSR3Q9NYQ7 3312 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 ZNF503-AS2A6NEH8 195 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 HLA-HP01893 362 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 CRYABP02511 175 aaKnown RBP12.9□□□□□ -0.34
TPM3-208ENST00000341485 PET100P0DJ07 73 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 ZNF728P0DKX0 622 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 CCL2P13500 99 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 PIGPP57054 158 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 TMPRSS3P57727 454 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 STK11Q15831 433 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 ZNF585AQ6P3V2 769 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 ATRAIDQ6UW56 229 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 SLC25A26Q70HW3 274 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 ZNF611Q8N823 705 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 OR56B2PQ8NGI1 322 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 TMED6Q8WW62 240 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 EXTL1Q92935 676 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 MARC2Q969Z3 335 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 GP6Q9HCN6 339 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 PLSCR2Q9NRY7 297 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 CLCF1Q9UBD9 225 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 GLS2Q9UI32 602 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 LHX6Q9UPM6 363 aa12.9□□□□□ -0.34
TPM3-208ENST00000341485 APOC3P02656 99 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 CD79AP11912 226 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 CCNOP22674 350 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 NPBWR2P48146 333 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 MALLQ13021 153 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 GGNBP1Q5YKI7 109 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 TMEM200AQ86VY9 491 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 FOXRED2Q8IWF2 684 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 GMPPAQ96IJ6 420 aaPredicted RBP12.89□□□□□ -0.35
TPM3-208ENST00000341485 CNTNAP3BQ96NU0 1288 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 REPIN1Q9BWE0 567 aaKnown RBP12.89□□□□□ -0.35
TPM3-208ENST00000341485 CNTNAP3Q9BZ76 1288 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 PIGMQ9H3S5 423 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 ZNF286AQ9HBT8 521 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 GLRX2Q9NS18 164 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 TP53TG5Q9Y2B4 290 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 PQLC2LA1A4F0 135 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 HKR1P10072 659 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 FXYD4P59646 89 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 TAGLNQ01995 201 aaKnown RBP12.89□□□□□ -0.35
TPM3-208ENST00000341485 PAPOLGQ9BWT3 736 aaKnown RBP12.89□□□□□ -0.35
TPM3-208ENST00000341485 NAA60Q9H7X0 242 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 PCDHB16Q9NRJ7 776 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 TUBD1Q9UJT1 453 aa12.89□□□□□ -0.35
TPM3-208ENST00000341485 C5orf49A4QMS7 147 aa12.88□□□□□ -0.35
TPM3-208ENST00000341485 FAM157CP0CG43 387 aa12.88□□□□□ -0.35
TPM3-208ENST00000341485 FCGR2CP31995 323 aa12.88□□□□□ -0.35
TPM3-208ENST00000341485 UCNP55089 124 aa12.88□□□□□ -0.35
TPM3-208ENST00000341485 PRDX4Q13162 271 aa12.88□□□□□ -0.35
TPM3-208ENST00000341485 TMEM187Q14656 261 aa12.88□□□□□ -0.35
TPM3-208ENST00000341485 SP6Q3SY56 376 aa12.88□□□□□ -0.35
TPM3-208ENST00000341485 CCDC36Q8IYA8 594 aa12.88□□□□□ -0.35
TPM3-208ENST00000341485 C12orf4Q9NQ89 552 aa12.88□□□□□ -0.35
TPM3-208ENST00000341485 PRSS50Q9UI38 385 aa12.88□□□□□ -0.35
TPM3-208ENST00000341485 RAXQ9Y2V3 346 aa12.88□□□□□ -0.35
TPM3-208ENST00000341485 AKAP13Q12802 2813 aa12.88□□□□□ -0.35
TPM3-208ENST00000341485 RAB19A4D1S5 217 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 TSPAN4O14817 238 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 BET1O15155 118 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 SS18L1O75177 396 aaPredicted RBP12.87□□□□□ -0.35
TPM3-208ENST00000341485 OR5AC1P0C628 307 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 FUT3P21217 361 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 Q8NFD4 153 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 RNF141Q8WVD5 230 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 HPSE2Q8WWQ2 592 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 RTN4IP1Q8WWV3 396 aaPredicted RBP12.87□□□□□ -0.35
TPM3-208ENST00000341485 OR2S2Q9NQN1 319 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 OR7C1O76099 320 aaPredicted RBP12.87□□□□□ -0.35
TPM3-208ENST00000341485 IFNA21P01568 189 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 COX5BP10606 129 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 BCL3P20749 454 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 PMELP40967 661 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 ZNF273Q14593 569 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 ABCA11PQ4W5N1 156 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 PHLDA2Q53GA4 152 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 TMEM211Q6ICI0 200 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 OR2A2Q6IF42 318 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 UQCC3Q6UW78 93 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 FAM180AQ6UWF9 173 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 SPERTQ8NA61 448 aa12.87□□□□□ -0.35
TPM3-208ENST00000341485 SLAMF9Q96A28 289 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms