RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 GRINAQ7Z429 371 aa10.37□□□□□ -0.75
RTN3-203ENST00000341307 PLPP7Q8NBV4 271 aa10.37□□□□□ -0.75
RTN3-203ENST00000341307 ZPLD1Q8TCW7 415 aa10.37□□□□□ -0.75
RTN3-203ENST00000341307 GRHL3Q8TE85 626 aa10.37□□□□□ -0.75
RTN3-203ENST00000341307 TMEM170AQ8WVE7 144 aa10.37□□□□□ -0.75
RTN3-203ENST00000341307 ZCCHC14Q8WYQ9 949 aaKnown RBP10.37□□□□□ -0.75
RTN3-203ENST00000341307 PRRX2Q99811 253 aa10.37□□□□□ -0.75
RTN3-203ENST00000341307 FLRT3Q9NZU0 649 aa10.37□□□□□ -0.75
RTN3-203ENST00000341307 MRM2Q9UI43 246 aaKnown RBP10.37□□□□□ -0.75
RTN3-203ENST00000341307 SERTAD3Q9UJW9 196 aa10.37□□□□□ -0.75
RTN3-203ENST00000341307 GTF2A1LQ9UNN4 478 aa10.37□□□□□ -0.75
RTN3-203ENST00000341307 SLC7A11Q9UPY5 501 aa10.37□□□□□ -0.75
RTN3-203ENST00000341307 SCDO00767 359 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 AHSA1O95433 338 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 HSPB1P04792 205 aaKnown RBP10.36□□□□□ -0.75
RTN3-203ENST00000341307 DBIP07108 87 aaKnown RBP10.36□□□□□ -0.75
RTN3-203ENST00000341307 PI3P19957 117 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 RPS4Y1P22090 263 aaKnown RBP10.36□□□□□ -0.75
RTN3-203ENST00000341307 FOXL2P58012 376 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 WDR25Q64LD2 544 aaPredicted RBP10.36□□□□□ -0.75
RTN3-203ENST00000341307 SP5Q6BEB4 398 aaPredicted RBP10.36□□□□□ -0.75
RTN3-203ENST00000341307 H1FOOQ8IZA3 346 aaPredicted RBP10.36□□□□□ -0.75
RTN3-203ENST00000341307 CIB3Q96Q77 187 aaPredicted RBP10.36□□□□□ -0.75
RTN3-203ENST00000341307 OR8B4Q96RC9 309 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 PYGO2Q9BRQ0 406 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 GPR132Q9UNW8 380 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 PAM16Q9Y3D7 125 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 RFNGQ9Y644 331 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 CDC14CA4D256 554 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 ANKUB1A6NFN9 424 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 TMEM150CB9EJG8 249 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 NKX2-2O95096 273 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 KNG1P01042 644 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 CTXN2P0C2S0 81 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 CD33P20138 364 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 OR1Q1Q15612 314 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 TMEM176BQ3YBM2 270 aaPredicted RBP10.36□□□□□ -0.75
RTN3-203ENST00000341307 OCIAD2Q56VL3 154 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 S100A7AQ86SG5 101 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 RCBTB1Q8NDN9 531 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 OR6K6Q8NGW6 343 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 DGAT2Q96PD7 388 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 ZNF430Q9H8G1 570 aaPredicted RBP10.36□□□□□ -0.75
RTN3-203ENST00000341307 KIAA1456Q9P272 454 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 OTOGLQ3ZCN5 2332 aa10.36□□□□□ -0.75
RTN3-203ENST00000341307 CELSR3Q9NYQ7 3312 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 IGHV1OR21-1A0A087WYE8 117 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 PATE3B3GLJ2 98 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 F6UZH7 168 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 ABHD16AO95870 558 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 IFNA21P01568 189 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 TMEM225BP0DP42 221 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 MMP9P14780 707 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 RPL4P36578 427 aaKnown RBP10.35□□□□□ -0.75
RTN3-203ENST00000341307 UBE2G2P60604 165 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 ENDOGQ14249 297 aaKnown RBP10.35□□□□□ -0.75
RTN3-203ENST00000341307 ELOA3BQ3SY89 546 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 ZNF506Q5JVG8 444 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 TPTE2P1Q5T6R2 138 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 TOMM20LQ6UXN7 152 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 ELOA3Q8NG57 546 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 OR4C5Q8NGB2 326 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 C16orf52Q8NHV5 167 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 TMEM37Q8WXS4 190 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 VSTM2LQ96N03 204 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 TBL1XR1Q9BZK7 514 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 P4HTMQ9NXG6 502 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 AHRRA9YTQ3 701 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 EIPR1Q53HC9 387 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 FBLN7Q53RD9 439 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 LDLRAD2Q5SZI1 272 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 PLXDC2Q6UX71 529 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 MOB3AQ96BX8 217 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 MS4A10Q96PG2 267 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 RBM7Q9Y580 266 aaKnown RBP10.35□□□□□ -0.75
RTN3-203ENST00000341307 MRPS18BQ9Y676 258 aaKnown RBP10.35□□□□□ -0.75
RTN3-203ENST00000341307 COX11Q9Y6N1 276 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 GVINP1Q7Z2Y8 2422 aa10.35□□□□□ -0.75
RTN3-203ENST00000341307 UNC13CQ8NB66 2214 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 CABIN1Q9Y6J0 2220 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 BORCS7-ASMTA0A0B4J1R7 106 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 C17orf105B2RV13 164 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 IFNA6P05013 189 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 CT45A8P0DMV1 189 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 CT45A9P0DMV2 189 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 APOBEC3AP31941 199 aaPredicted RBP10.34□□□□□ -0.75
RTN3-203ENST00000341307 ARL4DP49703 201 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 RANP62826 216 aaKnown RBP10.34□□□□□ -0.75
RTN3-203ENST00000341307 HIST1H3AP68431 136 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 NHLH1Q02575 133 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 SHBQ15464 509 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 TMEM95Q3KNT9 176 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 CT45A2Q5DJT8 189 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 FBXW12Q6X9E4 464 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 NUP54Q7Z3B4 507 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 WDR5BQ86VZ2 330 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 ZNF676Q8N7Q3 588 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 EXD3Q8N9H8 876 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 OR2D3Q8NGH3 330 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 OR10S1Q8NGN2 331 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms