RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 SLC9A3R2Q15599 337 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 ASCL4Q6XD76 172 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 TCF23Q7RTU1 214 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 PXT1Q8NFP0 134 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 MYDGFQ969H8 173 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 OR14A2Q96R54 314 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 OR5M11Q96RB7 305 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 NKX3-1Q99801 234 aaPredicted RBP12.59□□□□□ -0.39
VAPA-201ENST00000340541 TMEM138Q9NPI0 162 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 SCN3BQ9NY72 215 aa12.59□□□□□ -0.39
VAPA-201ENST00000340541 TRAV8-7A0A075B6U6 113 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 A0A0U1RQK1 487 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 MAGEA13PA6NCF6 341 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 PIN1P1O15428 100 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 CCL3L1P16619 93 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 LMO1P25800 156 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 OR3A1P47881 315 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 HSPA13P48723 471 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 ERVFRD-1P60508 538 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 ELP2Q6IA86 826 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 Q6P435 159 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 FIP1L1Q6UN15 594 aaKnown RBP12.58□□□□□ -0.4
VAPA-201ENST00000340541 Q6YL49 198 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 Q8NFD4 153 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 OR4S1Q8NGB4 309 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 MND1Q9BWT6 205 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 SLITRK2Q9H156 845 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 GSTK1Q9Y2Q3 226 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 TPRKBQ9Y3C4 175 aa12.58□□□□□ -0.4
VAPA-201ENST00000340541 C17orf98A8MV24 154 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 HOXA3O43365 443 aaPredicted RBP12.57□□□□□ -0.4
VAPA-201ENST00000340541 OR2H2O95918 312 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 MELTFP08582 738 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 FSTP19883 344 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 CRHBPP24387 322 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 BDKRB2P30411 391 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 OR3A4PP47883 348 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 PPP3R1P63098 170 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 GUCA2AQ02747 115 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 BLMHQ13867 455 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 DDI2Q5TDH0 399 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 GDPD3Q7L5L3 318 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 SATL1Q86VE3 508 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 PNKDQ8N490 385 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 OR5D13Q8NGL4 314 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 TBC1D15Q8TC07 691 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 TNFAIP8L1Q8WVP5 186 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 CPNE2Q96FN4 548 aaPredicted RBP12.57□□□□□ -0.4
VAPA-201ENST00000340541 DERL3Q96Q80 235 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 CHST6Q9GZX3 395 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 NOX4Q9NPH5 578 aa12.57□□□□□ -0.4
VAPA-201ENST00000340541 A0A1W2PPK0 400 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 MEX3AA1L020 520 aaKnown RBP12.56□□□□□ -0.4
VAPA-201ENST00000340541 SIRPB1O00241 398 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 SH2D1BO14796 132 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 NPFFO15130 113 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 MAGEB3O15480 346 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 GABRR1P24046 479 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 ZNF93P35789 620 aaPredicted RBP12.56□□□□□ -0.4
VAPA-201ENST00000340541 VHLP40337 213 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 PTGFRP43088 359 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 MTNR1BP49286 362 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 UBE2E1P51965 193 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 EDDM3BP56851 147 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 SPHARQ15513 63 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 GRK1Q15835 563 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 NCR3LG1Q68D85 454 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 C16orf87Q6PH81 154 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 LYPD6Q86Y78 171 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 TPRX1Q8N7U7 411 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 OR51T1Q8NGJ9 327 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 AJUBAQ96IF1 538 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 CNBD2Q96M20 576 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 GPER1Q99527 375 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 EXOSC4Q9NPD3 245 aaKnown RBP12.56□□□□□ -0.4
VAPA-201ENST00000340541 RAB26Q9ULW5 256 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 MMP24Q9Y5R2 645 aa12.56□□□□□ -0.4
VAPA-201ENST00000340541 A0A0G2JK05 382 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 A0A1B0GUS0 222 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 A0A1W2PPH5 198 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 A0A1W2PRD5 423 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 A0A1W2PRF3 423 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 A0A1W2PRM7 423 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 MGST3O14880 152 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 RGS10O43665 173 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 CDRT1O95170 752 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 SAA4P35542 130 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 TGFBR2P37173 567 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 MEF2CQ06413 473 aaPredicted RBP12.55□□□□□ -0.4
VAPA-201ENST00000340541 EDDM3AQ14507 147 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 INSL4Q14641 139 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 UNQ9370/PRO34162Q6UXP9 181 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 LDLRAD3Q86YD5 345 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 OR10K1Q8NGX5 313 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 ZDHHC16Q969W1 377 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 ZNF184Q99676 751 aaPredicted RBP12.55□□□□□ -0.4
VAPA-201ENST00000340541 IL36GQ9NZH8 169 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 GLS2Q9UI32 602 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 FOXJ3Q9UPW0 622 aa12.55□□□□□ -0.4
VAPA-201ENST00000340541 SLC33A1O00400 549 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms