RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RAB3DO95716 219 aa12.4□□□□□ -0.42
CBX3-201ENST00000337620 PLA1AQ53H76 456 aa12.4□□□□□ -0.42
CBX3-201ENST00000337620 FIP1L1Q6UN15 594 aaKnown RBP12.4□□□□□ -0.42
CBX3-201ENST00000337620 ZNF782Q6ZMW2 699 aaPredicted RBP12.4□□□□□ -0.42
CBX3-201ENST00000337620 BPIFB2Q8N4F0 458 aa12.4□□□□□ -0.42
CBX3-201ENST00000337620 BOLLQ8N9W6 283 aaKnown RBP12.4□□□□□ -0.42
CBX3-201ENST00000337620 OR56B4Q8NH76 319 aa12.4□□□□□ -0.42
CBX3-201ENST00000337620 DEDD2Q8WXF8 326 aa12.4□□□□□ -0.42
CBX3-201ENST00000337620 RDH5Q92781 318 aa12.4□□□□□ -0.42
CBX3-201ENST00000337620 DIRC2Q96SL1 478 aa12.4□□□□□ -0.42
CBX3-201ENST00000337620 DHRS9Q9BPW9 319 aa12.4□□□□□ -0.42
CBX3-201ENST00000337620 SPACA1Q9HBV2 294 aa12.4□□□□□ -0.42
CBX3-201ENST00000337620 HES4Q9HCC6 221 aa12.4□□□□□ -0.42
CBX3-201ENST00000337620 DYNLRB1Q9NP97 96 aa12.4□□□□□ -0.42
CBX3-201ENST00000337620 ZNF107Q9UII5 783 aaPredicted RBP12.4□□□□□ -0.42
CBX3-201ENST00000337620 B9A039 149 aa12.4□□□□□ -0.43
CBX3-201ENST00000337620 MCRIP1C9JLW8 97 aa12.4□□□□□ -0.43
CBX3-201ENST00000337620 H3BUI4 141 aa12.4□□□□□ -0.43
CBX3-201ENST00000337620 CSN2P05814 226 aa12.4□□□□□ -0.43
CBX3-201ENST00000337620 PMELP40967 661 aa12.4□□□□□ -0.43
CBX3-201ENST00000337620 RSBN1Q5VWQ0 802 aaPredicted RBP12.4□□□□□ -0.43
CBX3-201ENST00000337620 ACP7Q6ZNF0 438 aa12.4□□□□□ -0.43
CBX3-201ENST00000337620 SUMF2Q8NBJ7 301 aa12.4□□□□□ -0.43
CBX3-201ENST00000337620 SNAPC3Q92966 411 aa12.4□□□□□ -0.43
CBX3-201ENST00000337620 TMEM204Q9BSN7 226 aa12.4□□□□□ -0.43
CBX3-201ENST00000337620 TINAGL1Q9GZM7 467 aaPredicted RBP12.4□□□□□ -0.43
CBX3-201ENST00000337620 GCM1Q9NP62 436 aa12.4□□□□□ -0.43
CBX3-201ENST00000337620 TREM2Q9NZC2 230 aa12.4□□□□□ -0.43
CBX3-201ENST00000337620 RCC2Q9P258 522 aaKnown RBP12.4□□□□□ -0.43
CBX3-201ENST00000337620 SIRPB1O00241 398 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 SH2D1BO14796 132 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 TCRBP04435 133 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 AMY2BP19961 511 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 GATA4P43694 442 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 ZNF146Q15072 292 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 MST1LQ2TV78 715 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 SPIN3Q5JUX0 258 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 Q6P435 159 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 HOGA1Q86XE5 327 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 MUC15Q8N387 334 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 BEST4Q8NFU0 473 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 OR4K15Q8NH41 348 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 DECR2Q9NUI1 292 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 FAIMQ9NVQ4 179 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 PKDREJQ9NTG1 2253 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 FLNCQ14315 2725 aa12.39□□□□□ -0.43
CBX3-201ENST00000337620 CACNA1DQ01668 2161 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 TRAV6A0A075B6T7 132 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 TRAV24A0A0B4J272 114 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 OR2H2O95918 312 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 PMP2P02689 132 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 AMY2AP04746 511 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 HRH1P35367 487 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 CEBPDP49716 269 aaPredicted RBP12.38□□□□□ -0.43
CBX3-201ENST00000337620 EFNB3Q15768 340 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 RNASE10Q5GAN6 216 aaKnown RBP12.38□□□□□ -0.43
CBX3-201ENST00000337620 OR51S1Q8NGJ8 323 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 OR10Z1Q8NGY1 313 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 UPRTQ96BW1 309 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 DPCDQ9BVM2 203 aaPredicted RBP12.38□□□□□ -0.43
CBX3-201ENST00000337620 CHMP1AQ9HD42 196 aaPredicted RBP12.38□□□□□ -0.43
CBX3-201ENST00000337620 GLS2Q9UI32 602 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 ANAPC10Q9UM13 185 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 PPP1R3CQ9UQK1 317 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 LRBAP50851 2863 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 HAND1O96004 215 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 CD74P04233 296 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 ADH4P08319 380 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 EGR1P18146 543 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 NAT1P18440 290 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 RAB25P57735 213 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 SMIM21Q3B7S5 101 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 GCSAMQ8N6F7 178 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 OR5T2Q8NGG2 359 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 FAM222BQ8WU58 562 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 MS4A5Q9H3V2 200 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 IFT22Q9H7X7 185 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 NUDT15Q9NV35 164 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 COPZ2Q9P299 210 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 PLEKHA6Q9Y2H5 1048 aa12.38□□□□□ -0.43
CBX3-201ENST00000337620 SRRM5B3KS81 715 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 CD55P08174 381 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 FCGR3AP08637 254 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 TNFRSF1AP19438 455 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 CFHR2P36980 270 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 MICBQ29980 383 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 PAN3Q58A45 887 aaKnown RBP12.37□□□□□ -0.43
CBX3-201ENST00000337620 CREB3L1Q96BA8 519 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 MARVELD1Q9BSK0 173 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 EGLN1Q9GZT9 426 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 C12orf4Q9NQ89 552 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 ING3Q9NXR8 418 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 ETAA1Q9NY74 926 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 RASL12Q9NYN1 266 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 DNAJB11Q9UBS4 358 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 NUBP2Q9Y5Y2 271 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 ABCA4P78363 2273 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 RFPL4AA6NLU0 287 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 RFPL4AL1F8VTS6 287 aa12.37□□□□□ -0.43
CBX3-201ENST00000337620 INMT-MINDY4F8WBC2 141 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms