RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 MALLQ13021 153 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 CLEC18BQ6UXF7 455 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 CLEC9AQ6UXN8 241 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 TMUB2Q71RG4 321 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 SLC25A42Q86VD7 318 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 SPSB1Q96BD6 273 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 OR2A7Q96R45 310 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 RTBDNQ9BSG5 229 aaPredicted RBP10.8□□□□□ -0.68
LIMK1-201ENST00000336180 LRFN3Q9BTN0 628 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 WDR13Q9H1Z4 485 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 ZNF71Q9NQZ8 489 aaPredicted RBP10.8□□□□□ -0.68
LIMK1-201ENST00000336180 MTCH1Q9NZJ7 389 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 ZGRF1Q86YA3 2104 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 FOXI3A8MTJ6 420 aaPredicted RBP10.8□□□□□ -0.68
LIMK1-201ENST00000336180 H0YL77 283 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 SIGLEC5O15389 551 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 GRPP07492 148 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 UBBP0CG47 229 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 RD3LP0DJH9 198 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 IKZF1Q13422 519 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 ZNF546Q86UE3 836 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 TMEM200AQ86VY9 491 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 HOGA1Q86XE5 327 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 REPIN1Q9BWE0 567 aaKnown RBP10.8□□□□□ -0.68
LIMK1-201ENST00000336180 ZFP57Q9NU63 452 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 NCOR2Q9Y618 2525 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 FUT6P51993 359 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 DAZAP2Q15038 168 aaPredicted RBP10.8□□□□□ -0.68
LIMK1-201ENST00000336180 OR8B8Q15620 311 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 UNQ6126/PRO20091Q6UXV3 157 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 LHFPL2Q6ZUX7 228 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 BCL2L2Q92843 193 aaPredicted RBP10.8□□□□□ -0.68
LIMK1-201ENST00000336180 ZNF75AQ96N20 296 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 DMRTA2Q96SC8 542 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 METTL8Q9H825 291 aaKnown RBP10.8□□□□□ -0.68
LIMK1-201ENST00000336180 RNF122Q9H9V4 155 aa10.8□□□□□ -0.68
LIMK1-201ENST00000336180 XRCC2O43543 280 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 OR5H8P0DN80 308 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 MPGP29372 298 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 MECP2P51608 486 aaKnown RBP10.79□□□□□ -0.68
LIMK1-201ENST00000336180 UBE2NP61088 152 aaKnown RBP10.79□□□□□ -0.68
LIMK1-201ENST00000336180 SUPT4H1P63272 117 aaKnown RBP10.79□□□□□ -0.68
LIMK1-201ENST00000336180 SSBP1Q04837 148 aaKnown RBP10.79□□□□□ -0.68
LIMK1-201ENST00000336180 SLC16A13Q7RTY0 426 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 OR5AP2Q8NGF4 316 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 PKDREJQ9NTG1 2253 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 COL12A1Q99715 3063 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 ZNF724A8MTY0 619 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 NXPH3O95157 252 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 CHATP28329 748 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 FABP6P51161 128 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 KRTAP27-1Q3LI81 207 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 NSUN5P2Q63ZY6 315 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 ZDHHC23Q8IYP9 409 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 OR5L1Q8NGL2 311 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 PHB2Q99623 299 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 VRK1Q99986 396 aaPredicted RBP10.79□□□□□ -0.68
LIMK1-201ENST00000336180 LINC00470Q9BZP3 86 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 PRR33A8MZF0 331 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 FCGR3AP08637 254 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 EIF2S3P41091 472 aaKnown RBP10.79□□□□□ -0.68
LIMK1-201ENST00000336180 S100A10P60903 97 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 TMEM42Q69YG0 159 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 VHLLQ6RSH7 139 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 ZNF826PQ6ZT77 177 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 ZNF610Q8N9Z0 462 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 OR5M8Q8NGP6 311 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 APOBEC3DQ96AK3 386 aaPredicted RBP10.79□□□□□ -0.68
LIMK1-201ENST00000336180 CXorf58Q96LI9 332 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 OCSTAMPQ9BR26 566 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 UFSP2Q9NUQ7 469 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 FBLN5Q9UBX5 448 aa10.79□□□□□ -0.68
LIMK1-201ENST00000336180 TEX13DA0A0J9YY54 714 aaPredicted RBP10.78□□□□□ -0.68
LIMK1-201ENST00000336180 SCGB1D2O95969 90 aa10.78□□□□□ -0.68
LIMK1-201ENST00000336180 FCGR2CP31995 323 aa10.78□□□□□ -0.68
LIMK1-201ENST00000336180 TFAP2EQ6VUC0 442 aa10.78□□□□□ -0.68
LIMK1-201ENST00000336180 GTF3AQ92664 365 aaKnown RBP10.78□□□□□ -0.68
LIMK1-201ENST00000336180 OR10C1Q96KK4 312 aa10.78□□□□□ -0.68
LIMK1-201ENST00000336180 PRDM14Q9GZV8 571 aa10.78□□□□□ -0.68
LIMK1-201ENST00000336180 GPR132Q9UNW8 380 aa10.78□□□□□ -0.68
LIMK1-201ENST00000336180 PTPRBP23467 1997 aa10.78□□□□□ -0.68
LIMK1-201ENST00000336180 MPV17P39210 176 aa10.78□□□□□ -0.68
LIMK1-201ENST00000336180 FAM53AQ6NSI3 398 aaPredicted RBP10.78□□□□□ -0.68
LIMK1-201ENST00000336180 HIST1H2AAQ96QV6 131 aa10.78□□□□□ -0.68
LIMK1-201ENST00000336180 TM2D1Q9BX74 207 aa10.78□□□□□ -0.68
LIMK1-201ENST00000336180 TRAV17A0A0B4J275 112 aa10.77□□□□□ -0.68
LIMK1-201ENST00000336180 TNFSF12O43508 249 aa10.77□□□□□ -0.68
LIMK1-201ENST00000336180 CALCRP30988 508 aa10.77□□□□□ -0.68
LIMK1-201ENST00000336180 KIR2DL2P43627 348 aaPredicted RBP10.77□□□□□ -0.68
LIMK1-201ENST00000336180 RBM11P57052 281 aaKnown RBP10.77□□□□□ -0.68
LIMK1-201ENST00000336180 FLI1Q01543 452 aaPredicted RBP10.77□□□□□ -0.68
LIMK1-201ENST00000336180 COLCA1Q6ZS62 124 aa10.77□□□□□ -0.68
LIMK1-201ENST00000336180 OVCH2Q7RTZ1 564 aa10.77□□□□□ -0.68
LIMK1-201ENST00000336180 OR1J1Q8NGS3 322 aa10.77□□□□□ -0.68
LIMK1-201ENST00000336180 SLC25A40Q8TBP6 338 aa10.77□□□□□ -0.68
LIMK1-201ENST00000336180 EXTL1Q92935 676 aa10.77□□□□□ -0.68
LIMK1-201ENST00000336180 MSL2Q9HCI7 577 aa10.77□□□□□ -0.68
LIMK1-201ENST00000336180 COMMD9Q9P000 198 aa10.77□□□□□ -0.68
LIMK1-201ENST00000336180 ANXA10Q9UJ72 324 aa10.77□□□□□ -0.68
LIMK1-201ENST00000336180 COL6A6A6NMZ7 2263 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms