RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 LNP1A1A4G5 178 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 NME2P1O60361 137 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 CYTIPO60759 359 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 OMGP23515 440 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 NHLH2Q02577 135 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 OR1C1Q15619 314 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 C17orf78Q8N4C9 275 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 TP53RKQ96S44 253 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 STARD10Q9Y365 291 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 SCTP09683 121 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 OR8U9P0C7N5 309 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 FUT6P51993 359 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 PRDX4Q13162 271 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 TMEM187Q14656 261 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 Q6ZRG5 221 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 MYPOPQ86VE0 399 aaPredicted RBP12.79□□□□□ -0.36
UBA1-201ENST00000335972 HSD17B11Q8NBQ5 300 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 OR8U1Q8NH10 309 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 WFDC1Q9HC57 220 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 GLS2Q9UI32 602 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 SYNGR1O43759 233 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 PDCD6O75340 191 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 IL32P24001 234 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 RBM11P57052 281 aaKnown RBP12.79□□□□□ -0.36
UBA1-201ENST00000335972 DHRS13Q6UX07 377 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 CPNE4Q96A23 557 aaPredicted RBP12.79□□□□□ -0.36
UBA1-201ENST00000335972 DEFB127Q9H1M4 99 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 SAV1Q9H4B6 383 aaPredicted RBP12.79□□□□□ -0.36
UBA1-201ENST00000335972 ZNF286AQ9HBT8 521 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 TMEM100Q9NV29 134 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 KCNIP3Q9Y2W7 256 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 AMDHD2Q9Y303 409 aa12.79□□□□□ -0.36
UBA1-201ENST00000335972 B4E171 279 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 DEDDO75618 318 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 PET100P0DJ07 73 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 TSPAN7P41732 249 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 HERV-K104P61576 105 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 TMEM42Q69YG0 159 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 HAGHLQ6PII5 290 aaPredicted RBP12.78□□□□□ -0.36
UBA1-201ENST00000335972 ADAMTS17Q8TE56 1095 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 EXTL1Q92935 676 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 SH3BGRL3Q9H299 93 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 ZNF552Q9H707 407 aaPredicted RBP12.78□□□□□ -0.36
UBA1-201ENST00000335972 BOKQ9UMX3 212 aaPredicted RBP12.78□□□□□ -0.36
UBA1-201ENST00000335972 RCL1Q9Y2P8 373 aaKnown RBP12.78□□□□□ -0.36
UBA1-201ENST00000335972 ESPL1Q14674 2120 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 CACNA1DQ01668 2161 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 HS3ST1O14792 307 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 LHX2P50458 406 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 ZNF616Q08AN1 781 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 HIKESHIQ53FT3 197 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 NUFIP2Q7Z417 695 aaKnown RBP12.78□□□□□ -0.36
UBA1-201ENST00000335972 GLYATL2Q8WU03 294 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 C10orf35Q96D05 121 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 UQCC1Q9NVA1 299 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 ZNF732B4DXR9 585 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 PCBD1P61457 104 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 ARL6IP1Q15041 203 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 SURF2Q15527 256 aaPredicted RBP12.78□□□□□ -0.36
UBA1-201ENST00000335972 Q6ZSR3 168 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 MRPL21Q7Z2W9 205 aaKnown RBP12.78□□□□□ -0.36
UBA1-201ENST00000335972 RDH5Q92781 318 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 LIPGQ9Y5X9 500 aa12.78□□□□□ -0.36
UBA1-201ENST00000335972 CACNA1GO43497 2377 aa12.77□□□□□ -0.36
UBA1-201ENST00000335972 C19orf67A6NJJ6 358 aa12.77□□□□□ -0.36
UBA1-201ENST00000335972 HSD17B6O14756 317 aa12.77□□□□□ -0.36
UBA1-201ENST00000335972 LYL1P12980 280 aa12.77□□□□□ -0.36
UBA1-201ENST00000335972 PJVKQ0ZLH3 352 aa12.77□□□□□ -0.36
UBA1-201ENST00000335972 TMEM268Q5VZI3 342 aa12.77□□□□□ -0.36
UBA1-201ENST00000335972 HPSE2Q8WWQ2 592 aa12.77□□□□□ -0.36
UBA1-201ENST00000335972 TTTY12Q9BZ98 90 aa12.77□□□□□ -0.36
UBA1-201ENST00000335972 ZNF703Q9H7S9 590 aaPredicted RBP12.77□□□□□ -0.36
UBA1-201ENST00000335972 PRSS50Q9UI38 385 aa12.77□□□□□ -0.36
UBA1-201ENST00000335972 ZDHHC8Q9ULC8 765 aa12.77□□□□□ -0.36
UBA1-201ENST00000335972 DMXL1Q9Y485 3027 aa12.77□□□□□ -0.37
UBA1-201ENST00000335972 TERTO14746 1132 aaKnown RBP12.77□□□□□ -0.37
UBA1-201ENST00000335972 RRP8O43159 456 aaKnown RBP12.77□□□□□ -0.37
UBA1-201ENST00000335972 CLDN18P56856 261 aa12.77□□□□□ -0.37
UBA1-201ENST00000335972 RAB1AP62820 205 aa12.77□□□□□ -0.37
UBA1-201ENST00000335972 HOXA4Q00056 320 aaPredicted RBP12.77□□□□□ -0.37
UBA1-201ENST00000335972 NAAAQ02083 359 aa12.77□□□□□ -0.37
UBA1-201ENST00000335972 CLINT1Q14677 625 aa12.77□□□□□ -0.37
UBA1-201ENST00000335972 FBXW12Q6X9E4 464 aa12.77□□□□□ -0.37
UBA1-201ENST00000335972 TMEM251Q8N6I4 163 aa12.77□□□□□ -0.37
UBA1-201ENST00000335972 SLC35G3Q8N808 338 aa12.77□□□□□ -0.37
UBA1-201ENST00000335972 CLRN3Q8NCR9 226 aa12.77□□□□□ -0.37
UBA1-201ENST00000335972 RAB19A4D1S5 217 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 PCNX2A6NKB5 2137 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 FUT3P21217 361 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 ACP1P24666 158 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 PEAR1Q5VY43 1037 aaPredicted RBP12.76□□□□□ -0.37
UBA1-201ENST00000335972 DHRS11Q6UWP2 260 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 TMPRSS7Q7RTY8 843 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 ZFP82Q8N141 532 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 PRR18Q8N4B5 295 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 MMP26Q9NRE1 261 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 HSF4Q9ULV5 492 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 GTF3C1Q12789 2109 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 NKX2-6A6NCS4 301 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 PCP4L1A6NKN8 68 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms