RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 MICBQ29980 383 aa17.99■□□□□ 0.47
TPM1-204ENST00000334895 TMEM69Q5SWH9 247 aa17.99■□□□□ 0.47
TPM1-204ENST00000334895 RAB12Q6IQ22 244 aa17.99■□□□□ 0.47
TPM1-204ENST00000334895 FIP1L1Q6UN15 594 aaKnown RBP17.99■□□□□ 0.47
TPM1-204ENST00000334895 OR4M2Q8NGB6 313 aa17.99■□□□□ 0.47
TPM1-204ENST00000334895 IFT22Q9H7X7 185 aa17.99■□□□□ 0.47
TPM1-204ENST00000334895 CHODLQ9H9P2 273 aa17.99■□□□□ 0.47
TPM1-204ENST00000334895 ZMAT3Q9HA38 289 aaKnown RBP17.99■□□□□ 0.47
TPM1-204ENST00000334895 TRAV24A0A0B4J272 114 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 FABP12A6NFH5 140 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 SCGNO76038 276 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 PTHLHP12272 177 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 BTG1P62324 171 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 SCN1BQ07699 218 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 ZNF79Q15937 498 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 SPANXN2Q5MJ10 180 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 OLFML2AQ68BL7 652 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 BRICD5Q6PL45 260 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 C6orf201Q7Z4U5 140 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 ZNF525Q8N782 197 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 RAB3CQ96E17 227 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 ABHD1Q96SE0 405 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 TSC22D3Q99576 134 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 ELF5Q9UKW6 265 aaPredicted RBP17.98■□□□□ 0.47
TPM1-204ENST00000334895 CLDN25C9JDP6 229 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 SIRPB1O00241 398 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 MFNGO00587 321 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 DEGS1O15121 323 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 PDCD6O75340 191 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 IGHV2-70P01814 119 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 GYPAP02724 150 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 ZNF44P15621 663 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 GNB3P16520 340 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 PRDX2P32119 198 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 MNDAP41218 407 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 ATP5J2P56134 94 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 ZNF260Q3ZCT1 412 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 NKAPLQ5M9Q1 402 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 FAM131AQ6UXB0 335 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 CHST4Q8NCG5 386 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 PHF21AQ96BD5 680 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 PECRQ9BY49 303 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 GSX2Q9BZM3 304 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 SEBOXQ9HB31 216 aaPredicted RBP17.98■□□□□ 0.47
TPM1-204ENST00000334895 TMEM165Q9HC07 324 aa17.98■□□□□ 0.47
TPM1-204ENST00000334895 MRPS7Q9Y2R9 242 aaKnown RBP17.98■□□□□ 0.47
TPM1-204ENST00000334895 TRAV38-1A0A0B4J264 116 aa17.97■□□□□ 0.47
TPM1-204ENST00000334895 SLC33A1O00400 549 aaPredicted RBP17.97■□□□□ 0.47
TPM1-204ENST00000334895 SH2D1BO14796 132 aa17.97■□□□□ 0.47
TPM1-204ENST00000334895 TNFRSF13BO14836 293 aaPredicted RBP17.97■□□□□ 0.47
TPM1-204ENST00000334895 SSX4O60224 188 aa17.97■□□□□ 0.47
TPM1-204ENST00000334895 HIST1H1DP16402 221 aaKnown RBP17.97■□□□□ 0.47
TPM1-204ENST00000334895 FUT3P21217 361 aa17.97■□□□□ 0.47
TPM1-204ENST00000334895 IL18Q14116 193 aa17.97■□□□□ 0.47
TPM1-204ENST00000334895 ATAD3CQ5T2N8 411 aa17.97■□□□□ 0.47
TPM1-204ENST00000334895 AVPI1Q5T686 147 aa17.97■□□□□ 0.47
TPM1-204ENST00000334895 Q6ZTK2 550 aa17.97■□□□□ 0.47
TPM1-204ENST00000334895 GCDHQ92947 438 aaPredicted RBP17.97■□□□□ 0.47
TPM1-204ENST00000334895 PERPQ96FX8 193 aa17.97■□□□□ 0.47
TPM1-204ENST00000334895 SULT4A1Q9BR01 284 aa17.97■□□□□ 0.47
TPM1-204ENST00000334895 AUNIPQ9H7T9 357 aa17.97■□□□□ 0.47
TPM1-204ENST00000334895 A0A1B0GW55 424 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 PSPNO60542 156 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 FSTL3O95633 263 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 DUX4L2P0CJ85 424 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 DUX4L3P0CJ86 424 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 DUX4L4P0CJ87 422 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 DUX4L5P0CJ88 424 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 DUX4L6P0CJ89 424 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 DUX4L7P0CJ90 424 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 LMO1P25800 156 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 NR4A2P43354 598 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 COL10A1Q03692 680 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 CDNFQ49AH0 187 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 DUX4L9Q6RFH8 374 aaPredicted RBP17.96■□□□□ 0.47
TPM1-204ENST00000334895 SUMF2Q8NBJ7 301 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 ST8SIA4Q92187 359 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 DUX4Q9UBX2 424 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 HSF4Q9ULV5 492 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 MAB21L2Q9Y586 359 aa17.96■□□□□ 0.47
TPM1-204ENST00000334895 TMEM82A0PJX8 343 aa17.95■□□□□ 0.46
TPM1-204ENST00000334895 TMEM235A6NFC5 223 aa17.95■□□□□ 0.46
TPM1-204ENST00000334895 ZNF737O75373 536 aa17.95■□□□□ 0.46
TPM1-204ENST00000334895 GABRA2P47869 451 aa17.95■□□□□ 0.46
TPM1-204ENST00000334895 TMEM33P57088 247 aa17.95■□□□□ 0.46
TPM1-204ENST00000334895 CARTPTQ16568 116 aa17.95■□□□□ 0.46
TPM1-204ENST00000334895 ZNF788Q6ZQV5 615 aa17.95■□□□□ 0.46
TPM1-204ENST00000334895 SNX29P2Q8IUI4 249 aa17.95■□□□□ 0.46
TPM1-204ENST00000334895 S100ZQ8WXG8 99 aa17.95■□□□□ 0.46
TPM1-204ENST00000334895 GAFA1Q96PS6 74 aa17.95■□□□□ 0.46
TPM1-204ENST00000334895 NEDD4LQ96PU5 975 aa17.95■□□□□ 0.46
TPM1-204ENST00000334895 CCL13Q99616 98 aa17.95■□□□□ 0.46
TPM1-204ENST00000334895 TMEM246Q9BRR3 403 aa17.95■□□□□ 0.46
TPM1-204ENST00000334895 FAAP24Q9BTP7 215 aa17.95■□□□□ 0.46
TPM1-204ENST00000334895 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.95■□□□□ 0.46
TPM1-204ENST00000334895 GLS2Q9UI32 602 aa17.95■□□□□ 0.46
TPM1-204ENST00000334895 NAV2Q8IVL1 2488 aa17.95■□□□□ 0.46
TPM1-204ENST00000334895 HSPB6O14558 160 aa17.94■□□□□ 0.46
TPM1-204ENST00000334895 PPIHO43447 177 aaKnown RBP17.94■□□□□ 0.46
TPM1-204ENST00000334895 SELLP14151 372 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms