RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 IGHV3-43A0A0B4J1X8 118 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 IGSF23A1L1A6 192 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 FRG2CA6NGY1 282 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 ISLRO14498 428 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 IGHV3-43DP0DP04 118 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 RCC1P18754 421 aaPredicted RBP8.72□□□□□ -1.01
COL4A6-201ENST00000334504 BRS3P32247 399 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 FAM3BP58499 235 aaPredicted RBP8.72□□□□□ -1.01
COL4A6-201ENST00000334504 C17orf99Q6UX52 265 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 MORN4Q8NDC4 146 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 CNRIP1Q96F85 164 aaPredicted RBP8.72□□□□□ -1.01
COL4A6-201ENST00000334504 CDCA3Q99618 268 aaPredicted RBP8.72□□□□□ -1.01
COL4A6-201ENST00000334504 CBLN4Q9NTU7 201 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 NUP188Q5SRE5 1749 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 MEX3AA1L020 520 aaKnown RBP8.72□□□□□ -1.01
COL4A6-201ENST00000334504 GOSR1O95249 250 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 SOD3P08294 240 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 PGA4P0DJD7 388 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 PGA5P0DJD9 388 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 CD226Q15762 336 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 PYCR3Q53H96 274 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 MRGPRGQ86SM5 289 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 OR1P1Q8NH06 330 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 PDE4DIPQ5VU43 2346 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 METTL12A8MUP2 240 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 FAM157CP0CG43 387 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 SLC25A42Q86VD7 318 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 MRPL24Q96A35 216 aaKnown RBP8.72□□□□□ -1.01
COL4A6-201ENST00000334504 C8orf44Q96CB5 159 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 A0A1B0GV72 72 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 MFSD2BA6NFX1 497 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 M0QZ24 198 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 ERVH48-1M5A8F1 160 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 EPPINO95925 133 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 CXCL2P19875 107 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 FMODQ06828 376 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 KLF9Q13886 244 aaPredicted RBP8.72□□□□□ -1.01
COL4A6-201ENST00000334504 REC114Q7Z4M0 266 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 SLC35E3Q7Z769 313 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 FAM131CQ96AQ9 280 aa8.72□□□□□ -1.01
COL4A6-201ENST00000334504 A0A0A6YYD5 115 aa8.71□□□□□ -1.01
COL4A6-201ENST00000334504 ORM1P02763 201 aa8.71□□□□□ -1.01
COL4A6-201ENST00000334504 MORN1Q5T089 497 aa8.71□□□□□ -1.01
COL4A6-201ENST00000334504 JMJD6Q6NYC1 403 aaPredicted RBP8.71□□□□□ -1.01
COL4A6-201ENST00000334504 ZNF784Q8NCA9 323 aaPredicted RBP8.71□□□□□ -1.01
COL4A6-201ENST00000334504 BAHD1Q8TBE0 780 aaPredicted RBP8.71□□□□□ -1.01
COL4A6-201ENST00000334504 SPPL3Q8TCT6 385 aa8.71□□□□□ -1.01
COL4A6-201ENST00000334504 LAMB4A4D0S4 1761 aa8.71□□□□□ -1.01
COL4A6-201ENST00000334504 KIR2DS2P43631 304 aa8.71□□□□□ -1.01
COL4A6-201ENST00000334504 TAS2R60P59551 318 aa8.71□□□□□ -1.01
COL4A6-201ENST00000334504 TCTN1Q2MV58 587 aa8.71□□□□□ -1.01
COL4A6-201ENST00000334504 NRIP2Q9BQI9 281 aa8.71□□□□□ -1.01
COL4A6-201ENST00000334504 IER2Q9BTL4 223 aa8.71□□□□□ -1.01
COL4A6-201ENST00000334504 UBE2ZQ9H832 354 aaPredicted RBP8.71□□□□□ -1.01
COL4A6-201ENST00000334504 DNAJC25-GNG10A0A024R161 153 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 A0A0B4J2E0 115 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 A0A1B0GX12 115 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 PRR35P0CG20 571 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 PUSL1Q8N0Z8 303 aaKnown RBP8.71□□□□□ -1.02
COL4A6-201ENST00000334504 LYG1Q8N1E2 194 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 OR4B1Q8NGF8 309 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 SARGQ9BW04 601 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 UQCR10Q9UDW1 63 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 CHD4Q14839 1912 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 LOXHD1Q8IVV2 1947 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 SYNGR2O43760 224 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 KLF7O75840 302 aaPredicted RBP8.71□□□□□ -1.02
COL4A6-201ENST00000334504 COL8A1P27658 744 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 RPL30P62888 115 aaKnown RBP8.71□□□□□ -1.02
COL4A6-201ENST00000334504 MRPL43Q8N983 215 aaKnown RBP8.71□□□□□ -1.02
COL4A6-201ENST00000334504 ALG14Q96F25 216 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 FGF22Q9HCT0 170 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF391Q9UJN7 358 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 PROCRQ9UNN8 238 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 A0A1W2PN81 502 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 SHISA8B8ZZ34 492 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 RER1O15258 196 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 KLK10O43240 276 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 ERVFRD-1P60508 538 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 RAE1P78406 368 aaKnown RBP8.71□□□□□ -1.02
COL4A6-201ENST00000334504 ADIPOQQ15848 244 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 OR1N1Q8NGS0 311 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 RPS4Y2Q8TD47 263 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 APOBEC3DQ96AK3 386 aaPredicted RBP8.71□□□□□ -1.02
COL4A6-201ENST00000334504 TSPAN32Q96QS1 320 aa8.71□□□□□ -1.02
COL4A6-201ENST00000334504 THAP10Q9P2Z0 257 aaPredicted RBP8.71□□□□□ -1.02
COL4A6-201ENST00000334504 DHRS3O75911 302 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 HAND1O96004 215 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 PNLIPRP2P54317 469 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 LDLRAD1Q5T700 205 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-201ENST00000334504 MRPL30Q8TCC3 161 aaKnown RBP8.7□□□□□ -1.02
COL4A6-201ENST00000334504 MS4A18H0YCH9 400 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 LANCL1O43813 399 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 CD74P04233 296 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 MGPP08493 103 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 CLDN18P56856 261 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 CEACAM16Q2WEN9 425 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 MS4A18Q3C1V0 323 aa8.7□□□□□ -1.02
COL4A6-201ENST00000334504 NPEPL1Q8NDH3 523 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms