RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 DEGS1O15121 323 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 MRPS14O60783 128 aaKnown RBP11.52□□□□□ -0.57
LIMS1-201ENST00000332345 RGS9O75916 674 aaPredicted RBP11.52□□□□□ -0.57
LIMS1-201ENST00000332345 VENTXO95231 258 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 IGHV1-69P01742 117 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 PRTN3P24158 256 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 LMO1P25800 156 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 EDDM3BP56851 147 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 GUCA2AQ02747 115 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 SCN1BQ07699 218 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 TPBGQ13641 420 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 TRAM1Q15629 374 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 GRK1Q15835 563 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 LIPKQ5VXJ0 399 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 METAP1DQ6UB28 335 aaPredicted RBP11.52□□□□□ -0.57
LIMS1-201ENST00000332345 UNQ9370/PRO34162Q6UXP9 181 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 ASCL4Q6XD76 172 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 BRD3OSQ6XYD6 125 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 C17orf107Q6ZR85 190 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 Q8N7P7 452 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 CHST4Q8NCG5 386 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 ZFAND2BQ8WV99 257 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 TMED9Q9BVK6 235 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 UNKLQ9H9P5 680 aaKnown RBP11.52□□□□□ -0.57
LIMS1-201ENST00000332345 NOX4Q9NPH5 578 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 IL36RNQ9UBH0 155 aa11.52□□□□□ -0.57
LIMS1-201ENST00000332345 TRAV8-7A0A075B6U6 113 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 TMEM82A0PJX8 343 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 FUOMA2VDF0 154 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 TRIM77I1YAP6 450 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 MGST3O14880 152 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 ZNF780AO75290 641 aaPredicted RBP11.51□□□□□ -0.57
LIMS1-201ENST00000332345 OR2H2O95918 312 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 CSTBP04080 98 aaKnown RBP11.51□□□□□ -0.57
LIMS1-201ENST00000332345 MAS1P04201 325 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 ZNF44P15621 663 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 GABARAPL2P60520 117 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 MEF2CQ06413 473 aaPredicted RBP11.51□□□□□ -0.57
LIMS1-201ENST00000332345 MLLT11Q13015 90 aaPredicted RBP11.51□□□□□ -0.57
LIMS1-201ENST00000332345 GPR176Q14439 515 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 TUSC1Q2TAM9 212 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 NCR3LG1Q68D85 454 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 CEACAM19Q7Z692 300 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 JAGN1Q8N5M9 183 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 SIGLECL1Q8N7X8 197 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 Q8NFD4 153 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 NR1H4Q96RI1 486 aaPredicted RBP11.51□□□□□ -0.57
LIMS1-201ENST00000332345 MGLLQ99685 303 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 TCF7L1Q9HCS4 588 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 SIRT7Q9NRC8 400 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 FBN1P35555 2871 aaKnown RBP11.51□□□□□ -0.57
LIMS1-201ENST00000332345 COL6A5A8TX70 2615 aa11.51□□□□□ -0.57
LIMS1-201ENST00000332345 DSCAML1Q8TD84 2053 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 A0A0G2JK05 382 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 hADV38S2A0JD32 116 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 SIRPB1O00241 398 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 PIN1P1O15428 100 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 PSPNO60542 156 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 CDRT1O95170 752 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 HTR3BO95264 441 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 CPEP16870 476 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 PSMA1P25786 263 aaKnown RBP11.5□□□□□ -0.57
LIMS1-201ENST00000332345 ERP29P30040 261 aaKnown RBP11.5□□□□□ -0.57
LIMS1-201ENST00000332345 MAP2K4P45985 399 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 OR3A4PP47883 348 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 UBE2E1P51965 193 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 SRSF2Q01130 221 aaKnown RBP11.5□□□□□ -0.57
LIMS1-201ENST00000332345 BAMBIQ13145 260 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 EDDM3AQ14507 147 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 TBCEQ15813 527 aaPredicted RBP11.5□□□□□ -0.57
LIMS1-201ENST00000332345 Q6P435 159 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 OR4S1Q8NGB4 309 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 OR51T1Q8NGJ9 327 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 PHYHIPQ92561 330 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 CHST6Q9GZX3 395 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 HEXA-AS1Q9H8Q6 139 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 IL36GQ9NZH8 169 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 SF3B6Q9Y3B4 125 aaKnown RBP11.5□□□□□ -0.57
LIMS1-201ENST00000332345 LRRC42Q9Y546 428 aa11.5□□□□□ -0.57
LIMS1-201ENST00000332345 SRMP19623 302 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 IL13RA2Q14627 380 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 KRTAP24-1Q3LI83 254 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 KIAA2026Q5HYC2 2103 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 RUSC1-AS1Q66K80 236 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 ZNF367Q7RTV3 350 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 PDZD9Q8IXQ8 264 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 OSR2Q8N2R0 312 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 SVOPQ8N4V2 548 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 NKAIN3Q8N8D7 197 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 OR10K1Q8NGX5 313 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 TMEM203Q969S6 136 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 FOXRED1Q96CU9 486 aaPredicted RBP11.49□□□□□ -0.57
LIMS1-201ENST00000332345 UQCC2Q9BRT2 126 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 SLITRK2Q9H156 845 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 PRDM13Q9H4Q3 707 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 ACOT13Q9NPJ3 140 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 ST3GAL6Q9Y274 331 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 FAM96BQ9Y3D0 163 aa11.49□□□□□ -0.57
LIMS1-201ENST00000332345 MAGEA13PA6NCF6 341 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 RNASEK-C17orf49H0YIS7 233 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms