RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 BLNKQ8WV28 456 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 PTP4A1Q93096 173 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 SNRPGP15A8MWD9 76 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 CDIPTO14735 213 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 CHEK1O14757 476 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 KLHDC1Q8N7A1 406 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 TOX3O15405 576 aaPredicted RBP8.98□□□□□ -0.97
CHD3-201ENST00000330494 CRYBA1P05813 215 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 RPL13AP40429 203 aaKnown RBP8.98□□□□□ -0.97
CHD3-201ENST00000330494 HMGA2P52926 109 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 PIGYQ3MUY2 71 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 GGNBP1Q5YKI7 109 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 RND1Q92730 232 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 GNPNAT1Q96EK6 184 aaPredicted RBP8.98□□□□□ -0.97
CHD3-201ENST00000330494 GPA33Q99795 319 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 CXXC4Q9H2H0 198 aa8.98□□□□□ -0.97
CHD3-201ENST00000330494 A0A1W2PPQ1 181 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 ZNF25P17030 456 aaPredicted RBP8.97□□□□□ -0.97
CHD3-201ENST00000330494 RAB7AP51149 207 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 EIF4EBP2Q13542 120 aaPredicted RBP8.97□□□□□ -0.97
CHD3-201ENST00000330494 CEBPEQ15744 281 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 ATP1A1-AS1Q5TC04 95 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 STPG1Q5TH74 334 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 LYPD8Q6UX82 237 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 ZNF385AQ96PM9 386 aaKnown RBP8.97□□□□□ -0.97
CHD3-201ENST00000330494 PECRQ9BY49 303 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 A0A087X0M5 115 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 A0A1B0GX30 115 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 TAS2R45P59539 299 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 IQCJQ1A5X6 159 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 PMS2CLQ68D20 193 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 RNF165Q6ZSG1 346 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 SLC16A12Q6ZSM3 486 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 ABHD1Q96SE0 405 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 C3orf85A0A1B0GTC6 90 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 CD300CQ08708 224 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 FOXO1Q12778 655 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 GLDNQ6ZMI3 551 aaPredicted RBP8.97□□□□□ -0.97
CHD3-201ENST00000330494 SLC25A45Q8N413 288 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 ZNF236Q9UL36 1845 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 C9orf170A2RU37 121 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 NKX2-8O15522 239 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 SPINK4O60575 86 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 TPPP2P59282 170 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 PRSS53Q2L4Q9 553 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 FFAR4Q5NUL3 377 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 DCAF10Q5QP82 559 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 C11orf87Q6NUJ2 197 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 SPNS3Q6ZMD2 512 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 LAMP3Q9UQV4 416 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 LIFP15018 202 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 ZNRF4Q8WWF5 429 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 CORO2AQ92828 525 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 MEGF10Q96KG7 1140 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 TCRBV16S1A1N1A0A5B0 115 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 ZNF320A2RRD8 509 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 CD3EP07766 207 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 ZNF17P17021 662 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 FPR2P25090 351 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 SRP14P37108 136 aaKnown RBP8.97□□□□□ -0.97
CHD3-201ENST00000330494 SMIM7Q9BQ49 75 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 PLEKHA2Q9HB19 425 aa8.97□□□□□ -0.97
CHD3-201ENST00000330494 LCTP09848 1927 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 MGAT2Q10469 447 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 OR2T6Q8NHC8 308 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 HGDQ93099 445 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 HES4Q9HCC6 221 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 DCAF16Q9NXF7 216 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 OR2J3O76001 311 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 FCARP24071 287 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 Q8IYB0 196 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 TRAF4Q9BUZ4 470 aaPredicted RBP8.96□□□□□ -0.97
CHD3-201ENST00000330494 RHOFQ9HBH0 211 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 OR1A1Q9P1Q5 309 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 TTRP02766 147 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 COX5AP20674 150 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 BPIFB3P59826 476 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 DHRS2Q13268 280 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 RFLNBQ8N5W9 214 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 TTTY12Q9BZ98 90 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 CACNG5Q9UF02 275 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 ZMIZ1Q9ULJ6 1067 aa8.96□□□□□ -0.97
CHD3-201ENST00000330494 SCN10AQ9Y5Y9 1956 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 PMCHP20382 165 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 FGF8P55075 233 aaPredicted RBP8.96□□□□□ -0.98
CHD3-201ENST00000330494 BAP18Q8IXM2 172 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 ZNF501Q96CX3 271 aaPredicted RBP8.96□□□□□ -0.98
CHD3-201ENST00000330494 CIB3Q96Q77 187 aaPredicted RBP8.96□□□□□ -0.98
CHD3-201ENST00000330494 TMEM74BQ9NUR3 256 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 CES1P1Q9UKY3 287 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 TUBAL3A6NHL2 446 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 CCL21O00585 134 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 CYC1P08574 325 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 MMP7P09237 267 aaPredicted RBP8.96□□□□□ -0.98
CHD3-201ENST00000330494 CLLU1Q5K131 121 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 SLC25A40Q8TBP6 338 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 GPR35Q9HC97 309 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 CACNA1IQ9P0X4 2223 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 IGKV3-7A0A075B6H7 116 aa8.96□□□□□ -0.98
CHD3-201ENST00000330494 CD37P11049 281 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms