RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PLEKHA1Q9HB21 404 aa11.68□□□□□ -0.54
CTHRC1-201ENST00000330295 IRGMA1A4Y4 181 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 PSMB11A5LHX3 300 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 OR5B21A6NL26 309 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 CDIPTO14735 213 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 LDLRAD4O15165 306 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 MAGEB4O15481 346 aaPredicted RBP11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 SYT7O43581 403 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 SERPINA3P01011 423 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 NRASP01111 189 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 SNRNP70P08621 437 aaKnown RBP11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 HCKP08631 526 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 LRRC36Q1X8D7 754 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 PLCXD3Q63HM9 321 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 ZNF788Q6ZQV5 615 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 MOB3CQ70IA8 216 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 C11orf53Q8IXP5 236 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 ENTHD1Q8IYW4 607 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 FAM185AQ8N0U4 392 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 OR10Z1Q8NGY1 313 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 HAVCR2Q8TDQ0 301 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 CYGBQ8WWM9 190 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 RAX2Q96IS3 184 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 GAFA1Q96PS6 74 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 ELL3Q9HB65 397 aaPredicted RBP11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 TBL2Q9Y4P3 447 aaKnown RBP11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 MUC4Q99102 2169 aa11.67□□□□□ -0.54
CTHRC1-201ENST00000330295 ZNF732B4DXR9 585 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 H3BUI4 141 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 CCL24O00175 119 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 DLGAP1O14490 977 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 SRSF10O75494 262 aaKnown RBP11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 LY6G6CO95867 125 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 UBCP0CG48 685 aaKnown RBP11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 GPM6AP51674 278 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 ZNF91Q05481 1191 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 RAB40BQ12829 278 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 MRPL28Q13084 256 aaKnown RBP11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 MED21Q13503 144 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 ABCA11PQ4W5N1 156 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 TP53I3Q53FA7 332 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 CEP78Q5JTW2 689 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 LDLRAD2Q5SZI1 272 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 TMEM244Q5VVB8 128 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 LPCAT4Q643R3 524 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 WDR82Q6UXN9 313 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 KRT74Q7RTS7 529 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 SSX6Q7RTT6 188 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 CATSPERDQ86XM0 798 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 ZNF573Q86YE8 665 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 DHRSXQ8N5I4 330 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 IL17DQ8TAD2 202 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 MED30Q96HR3 178 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 TLNRD1Q9H1K6 362 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 DCLRE1BQ9H816 532 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 ZFP57Q9NU63 452 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 SLC7A11Q9UPY5 501 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 SLC22A13Q9Y226 551 aa11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 EXOGQ9Y2C4 368 aaKnown RBP11.66□□□□□ -0.54
CTHRC1-201ENST00000330295 GATBO75879 557 aaKnown RBP11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 IGLV3-1P01715 115 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 TFF1P04155 84 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 HTR1AP08908 422 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 DBTP11182 482 aaKnown RBP11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 JUNBP17275 347 aaPredicted RBP11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 CSNK2BP67870 215 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 ZNF85Q03923 595 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 FAM76BQ5HYJ3 339 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 C16orf82Q7Z2V1 217 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 ZNF329Q86UD4 541 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 ZNF695Q8IW36 515 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 C11orf42Q8N5U0 333 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 RPL3LQ92901 407 aaKnown RBP11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 C10orf35Q96D05 121 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 LGALS12Q96DT0 336 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 AKR1E2Q96JD6 320 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 NEK6Q9HC98 313 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 SNTG1Q9NSN8 517 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 POLDIP2Q9Y2S7 368 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 V9GYS6 101 aa11.65□□□□□ -0.54
CTHRC1-201ENST00000330295 FAM90A22PA8MWA6 464 aa11.64□□□□□ -0.55
CTHRC1-201ENST00000330295 J3QLW9 94 aa11.64□□□□□ -0.55
CTHRC1-201ENST00000330295 SIGLEC5O15389 551 aa11.64□□□□□ -0.55
CTHRC1-201ENST00000330295 OCM2P0CE71 109 aa11.64□□□□□ -0.55
CTHRC1-201ENST00000330295 OCMP0CE72 109 aaPredicted RBP11.64□□□□□ -0.55
CTHRC1-201ENST00000330295 ZNF19P17023 458 aa11.64□□□□□ -0.55
CTHRC1-201ENST00000330295 GABRB1P18505 474 aa11.64□□□□□ -0.55
CTHRC1-201ENST00000330295 IL18R1Q13478 541 aa11.64□□□□□ -0.55
CTHRC1-201ENST00000330295 GALEQ14376 348 aa11.64□□□□□ -0.55
CTHRC1-201ENST00000330295 ODF4Q2M2E3 257 aa11.64□□□□□ -0.55
CTHRC1-201ENST00000330295 ZNF260Q3ZCT1 412 aa11.64□□□□□ -0.55
CTHRC1-201ENST00000330295 WDR86Q86TI4 376 aa11.64□□□□□ -0.55
CTHRC1-201ENST00000330295 OR14K1Q8NGZ2 314 aa11.64□□□□□ -0.55
CTHRC1-201ENST00000330295 OR2G2Q8NGZ5 317 aa11.64□□□□□ -0.55
CTHRC1-201ENST00000330295 OR51I2Q9H344 312 aa11.64□□□□□ -0.55
CTHRC1-201ENST00000330295 CHCHD3Q9NX63 227 aaKnown RBP11.64□□□□□ -0.55
CTHRC1-201ENST00000330295 A0A1B0GTI1 187 aa11.63□□□□□ -0.55
CTHRC1-201ENST00000330295 ODF3BA8MYP8 253 aa11.63□□□□□ -0.55
CTHRC1-201ENST00000330295 ANKRD65E5RJM6 399 aa11.63□□□□□ -0.55
CTHRC1-201ENST00000330295 J3QRE1 110 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms