RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 PNRC2Q9NPJ4 139 aaKnown RBP9.16□□□□□ -0.94
COL3A1-202ENST00000317840 P4HTMQ9NXG6 502 aa9.16□□□□□ -0.94
COL3A1-202ENST00000317840 H3BP45 60 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 YKT6O15498 198 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 ACKR3P25106 362 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 TAGLN2P37802 199 aaKnown RBP9.15□□□□□ -0.94
COL3A1-202ENST00000317840 SULT1A1P50225 295 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 CARD18P57730 90 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 KIAA0141Q14154 515 aaPredicted RBP9.15□□□□□ -0.94
COL3A1-202ENST00000317840 ZNF266Q14584 549 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 NCMAPQ5T1S8 102 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 BTNL8Q6UX41 500 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 PRR18Q8N4B5 295 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 UBAC2Q8NBM4 344 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 HIST1H2AAQ96QV6 131 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 SPIN2AQ99865 258 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 SPIN2BQ9BPZ2 258 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 TGIF2Q9GZN2 237 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 SLC35B3Q9H1N7 401 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 A0A0U1RQV5 110 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 COLCA2A8K830 154 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 CXCL13O43927 109 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 H2AFB1P0C5Y9 115 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 NAT2P11245 290 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 NOVA1P51513 510 aaKnown RBP9.15□□□□□ -0.94
COL3A1-202ENST00000317840 LIAT1Q6ZQX7 453 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 OR1F12Q8NHA8 337 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 IL1F10Q8WWZ1 152 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 Q96M66 194 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 POMT1Q9Y6A1 747 aa9.15□□□□□ -0.94
COL3A1-202ENST00000317840 PMS2P1A4D2B8 440 aa9.15□□□□□ -0.95
COL3A1-202ENST00000317840 HSD17B6O14756 317 aa9.15□□□□□ -0.95
COL3A1-202ENST00000317840 RAB5AP20339 215 aa9.15□□□□□ -0.95
COL3A1-202ENST00000317840 FKBP2P26885 142 aaKnown RBP9.15□□□□□ -0.95
COL3A1-202ENST00000317840 PPP1CCP36873 323 aaKnown RBP9.15□□□□□ -0.95
COL3A1-202ENST00000317840 CYB561P49447 251 aa9.15□□□□□ -0.95
COL3A1-202ENST00000317840 CCL11P51671 97 aa9.15□□□□□ -0.95
COL3A1-202ENST00000317840 ENDOGQ14249 297 aaKnown RBP9.15□□□□□ -0.95
COL3A1-202ENST00000317840 WIPI1Q5MNZ9 446 aaPredicted RBP9.15□□□□□ -0.95
COL3A1-202ENST00000317840 TMEM105Q8N8V8 129 aa9.15□□□□□ -0.95
COL3A1-202ENST00000317840 SPSB2Q99619 263 aa9.15□□□□□ -0.95
COL3A1-202ENST00000317840 TCEAL7Q9BRU2 100 aa9.15□□□□□ -0.95
COL3A1-202ENST00000317840 CACFD1Q9UGQ2 172 aa9.15□□□□□ -0.95
COL3A1-202ENST00000317840 DIDO1Q9BTC0 2240 aaKnown RBP9.14□□□□□ -0.95
COL3A1-202ENST00000317840 ARGFXA6NJG6 315 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 ACAA1P09110 424 aaPredicted RBP9.14□□□□□ -0.95
COL3A1-202ENST00000317840 RPS2P15880 293 aaKnown RBP9.14□□□□□ -0.95
COL3A1-202ENST00000317840 AADACP22760 399 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 NDUFA6P56556 154 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 CEACAM16Q2WEN9 425 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 PDZD11Q5EBL8 140 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 VASH2Q86V25 355 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 OR2C3Q8N628 320 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 SLC35G3Q8N808 338 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 UNKLQ9H9P5 680 aaKnown RBP9.14□□□□□ -0.95
COL3A1-202ENST00000317840 LRFN1Q9P244 771 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 CD5P06127 495 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 SEC11BP0C7V7 166 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 SNCAP37840 140 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 P2RY1P47900 373 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 ARG2P78540 354 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 HABP2Q14520 560 aaPredicted RBP9.14□□□□□ -0.95
COL3A1-202ENST00000317840 SPINK14Q6IE38 97 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 OR10AD1Q8NGE0 317 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 CPNE4Q96A23 557 aaPredicted RBP9.14□□□□□ -0.95
COL3A1-202ENST00000317840 A0A0J9YW62 118 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 PQLC2LA1A4F0 135 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 NKX2-6A6NCS4 301 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 GJE1A6NN92 205 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 CEACAM18A8MTB9 384 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 ZNF724A8MTY0 619 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 MSTNO14793 375 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 CCL1P22362 96 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 IL11RAQ14626 422 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 GPR157Q5UAW9 335 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 LHFPL2Q6ZUX7 228 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 DPPA2Q7Z7J5 298 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 CMTM1Q8IZ96 169 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 DEFB124Q8NES8 71 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 OR5C1Q8NGR4 320 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 LILRB1Q8NHL6 650 aaPredicted RBP9.14□□□□□ -0.95
COL3A1-202ENST00000317840 CALHM2Q9HA72 323 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 COA4Q9NYJ1 87 aa9.14□□□□□ -0.95
COL3A1-202ENST00000317840 STRAPQ9Y3F4 350 aaKnown RBP9.14□□□□□ -0.95
COL3A1-202ENST00000317840 CCDC187A0A096LP49 1063 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 LOC102725191A0A1B0GVB3 256 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 ADPRHL1Q8NDY3 354 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 OR51H1Q8NH63 302 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 SLC25A31Q9H0C2 315 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 MIOXQ9UGB7 285 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 PRRC2CQ9Y520 2896 aaKnown RBP9.13□□□□□ -0.95
COL3A1-202ENST00000317840 DANCRP0C864 163 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 RAB5CP51148 216 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 EXT1Q16394 746 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 IGSF11Q5DX21 431 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 WDR5BQ86VZ2 330 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 ZNF611Q8N823 705 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 LFNGQ8NES3 379 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 RARRES2Q99969 163 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 TMEM9BQ9NQ34 198 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms