RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 EFNB2P52799 333 aa14.37□□□□□ -0.11
TPM1-203ENST00000317516 SNU13P55769 128 aaKnown RBP14.37□□□□□ -0.11
TPM1-203ENST00000317516 P2RX3P56373 397 aa14.37□□□□□ -0.11
TPM1-203ENST00000317516 MINOS1Q5TGZ0 78 aa14.37□□□□□ -0.11
TPM1-203ENST00000317516 PQLC1Q8N2U9 271 aa14.37□□□□□ -0.11
TPM1-203ENST00000317516 TPRX1Q8N7U7 411 aa14.37□□□□□ -0.11
TPM1-203ENST00000317516 OR4S1Q8NGB4 309 aa14.37□□□□□ -0.11
TPM1-203ENST00000317516 OR10AC1Q8NH08 325 aa14.37□□□□□ -0.11
TPM1-203ENST00000317516 OR5AK2Q8NH90 309 aa14.37□□□□□ -0.11
TPM1-203ENST00000317516 RFT1Q96AA3 541 aa14.37□□□□□ -0.11
TPM1-203ENST00000317516 CPNE2Q96FN4 548 aaPredicted RBP14.37□□□□□ -0.11
TPM1-203ENST00000317516 NKX3-1Q99801 234 aaPredicted RBP14.37□□□□□ -0.11
TPM1-203ENST00000317516 SLC29A1Q99808 456 aa14.37□□□□□ -0.11
TPM1-203ENST00000317516 AMBNQ9NP70 447 aa14.37□□□□□ -0.11
TPM1-203ENST00000317516 FAM118AQ9NWS6 357 aa14.37□□□□□ -0.11
TPM1-203ENST00000317516 ERVK13-1Q9NX77 482 aa14.37□□□□□ -0.11
TPM1-203ENST00000317516 MYRFQ9Y2G1 1151 aa14.37□□□□□ -0.11
TPM1-203ENST00000317516 MINOS1-NBL1R4GNA1 71 aa14.37□□□□□ -0.11
TPM1-203ENST00000317516 TRGV10A0A0A0MS01 117 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 SIRPB1O00241 398 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 MAGEB3O15480 346 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 HCKP08631 526 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 CSF1P09603 554 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 TMEM225BP0DP42 221 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 LMO1P25800 156 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 PLA1AQ53H76 456 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 OR52W1Q6IF63 320 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 CHST4Q8NCG5 386 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 ZNF555Q8NEP9 628 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 NDNFQ8TB73 568 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 CLEC7AQ9BXN2 247 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 TMEM133Q9H2Q1 129 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 GAL3ST2Q9H3Q3 398 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 ISG20L2Q9H9L3 353 aaKnown RBP14.36□□□□□ -0.11
TPM1-203ENST00000317516 MRPS18AQ9NVS2 196 aaKnown RBP14.36□□□□□ -0.11
TPM1-203ENST00000317516 DHDHQ9UQ10 334 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 TCF19Q9Y242 345 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 SIGLEC9Q9Y336 463 aa14.36□□□□□ -0.11
TPM1-203ENST00000317516 IGHV2-26A0A0B4J1V2 119 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 IGKV1-12A0A0C4DH73 117 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 SULT1B1O43704 296 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 ZFPL1O95159 310 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 BAG2O95816 211 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 OR2H2O95918 312 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 IGKV1D-12P01611 117 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 ZNF44P15621 663 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 OR3A1P47881 315 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 RAB13P51153 203 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 DYNLT3P51808 116 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 SCN1BQ07699 218 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 KISS1Q15726 138 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 LPCAT4Q643R3 524 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 TCF23Q7RTU1 214 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 DYNAPQ8N1N2 210 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 PARP16Q8N5Y8 322 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 OR5D18Q8NGL1 313 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 SPACA5Q96QH8 159 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 TAS2R3Q9NYW6 316 aa14.35□□□□□ -0.11
TPM1-203ENST00000317516 DEGS1O15121 323 aa14.34□□□□□ -0.11
TPM1-203ENST00000317516 HTR1DP28221 377 aa14.34□□□□□ -0.11
TPM1-203ENST00000317516 IL18R1Q13478 541 aa14.34□□□□□ -0.11
TPM1-203ENST00000317516 PDLIM3Q53GG5 364 aaPredicted RBP14.34□□□□□ -0.11
TPM1-203ENST00000317516 RTN4RL2Q86UN3 420 aa14.34□□□□□ -0.11
TPM1-203ENST00000317516 OR52I1Q8NGK6 324 aa14.34□□□□□ -0.11
TPM1-203ENST00000317516 FAM110DQ8TAY7 271 aaPredicted RBP14.34□□□□□ -0.11
TPM1-203ENST00000317516 TSEN15Q8WW01 171 aaKnown RBP14.34□□□□□ -0.11
TPM1-203ENST00000317516 CORO2AQ92828 525 aa14.34□□□□□ -0.11
TPM1-203ENST00000317516 RDH12Q96NR8 316 aa14.34□□□□□ -0.11
TPM1-203ENST00000317516 PRSS22Q9GZN4 317 aa14.34□□□□□ -0.11
TPM1-203ENST00000317516 HILPDAQ9Y5L2 63 aa14.34□□□□□ -0.11
TPM1-203ENST00000317516 WNK1Q9H4A3 2382 aa14.34□□□□□ -0.11
TPM1-203ENST00000317516 A0A0G2JK05 382 aa14.33□□□□□ -0.12
TPM1-203ENST00000317516 A6NDX4 124 aa14.33□□□□□ -0.12
TPM1-203ENST00000317516 F2RL2O00254 374 aa14.33□□□□□ -0.12
TPM1-203ENST00000317516 CHST1O43916 411 aa14.33□□□□□ -0.12
TPM1-203ENST00000317516 RAB3AP20336 220 aa14.33□□□□□ -0.12
TPM1-203ENST00000317516 ARHGDIBP52566 201 aa14.33□□□□□ -0.12
TPM1-203ENST00000317516 SLC34A1Q06495 639 aa14.33□□□□□ -0.12
TPM1-203ENST00000317516 AESQ08117 197 aa14.33□□□□□ -0.12
TPM1-203ENST00000317516 HEPN1Q6WQI6 88 aa14.33□□□□□ -0.12
TPM1-203ENST00000317516 ABHD12Q8N2K0 398 aa14.33□□□□□ -0.12
TPM1-203ENST00000317516 KLHDC1Q8N7A1 406 aa14.33□□□□□ -0.12
TPM1-203ENST00000317516 ZNF596Q8TC21 504 aa14.33□□□□□ -0.12
TPM1-203ENST00000317516 STMN2Q93045 179 aa14.33□□□□□ -0.12
TPM1-203ENST00000317516 PDCD1LG2Q9BQ51 273 aa14.33□□□□□ -0.12
TPM1-203ENST00000317516 ZNF649Q9BS31 505 aa14.33□□□□□ -0.12
TPM1-203ENST00000317516 SMPD3Q9NY59 655 aaPredicted RBP14.33□□□□□ -0.12
TPM1-203ENST00000317516 IRGMA1A4Y4 181 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 E9PI62 339 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 PEX14O75381 377 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 TSPAN15O95858 294 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 CSN2P05814 226 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 CD2P06729 351 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 VSIG10L2P0DP72 767 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 DCKP27707 260 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 MTNR1BP49286 362 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 CCDC58Q4VC31 144 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 ZNF691Q5VV52 312 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 CCBE1Q6UXH8 406 aaPredicted RBP14.32□□□□□ -0.12
TPM1-203ENST00000317516 TMPRSS11AQ6ZMR5 421 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms