RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 OLFML2AQ68BL7 652 aa13.25□□□□□ -0.29
LSM1-201ENST00000311351 DHRS7BQ6IAN0 325 aaPredicted RBP13.25□□□□□ -0.29
LSM1-201ENST00000311351 LAIR2Q6ISS4 152 aa13.25□□□□□ -0.29
LSM1-201ENST00000311351 RPL22L1Q6P5R6 122 aaKnown RBP13.25□□□□□ -0.29
LSM1-201ENST00000311351 TMPRSS11AQ6ZMR5 421 aa13.25□□□□□ -0.29
LSM1-201ENST00000311351 GDPGP1Q6ZNW5 385 aa13.25□□□□□ -0.29
LSM1-201ENST00000311351 Q6ZSV7 163 aa13.25□□□□□ -0.29
LSM1-201ENST00000311351 LHFPL4Q7Z7J7 247 aa13.25□□□□□ -0.29
LSM1-201ENST00000311351 OR5D14Q8NGL3 314 aa13.25□□□□□ -0.29
LSM1-201ENST00000311351 OR13C5Q8NGS8 318 aa13.25□□□□□ -0.29
LSM1-201ENST00000311351 HAVCR2Q8TDQ0 301 aa13.25□□□□□ -0.29
LSM1-201ENST00000311351 ZNF714Q96N38 554 aa13.25□□□□□ -0.29
LSM1-201ENST00000311351 SEBOXQ9HB31 216 aaPredicted RBP13.25□□□□□ -0.29
LSM1-201ENST00000311351 EXOSC1Q9Y3B2 195 aaKnown RBP13.25□□□□□ -0.29
LSM1-201ENST00000311351 A0A1B0GUS0 222 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 CLPSL1A2RUU4 121 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 GABRPO00591 440 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 MGST3O14880 152 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 ALX3O95076 343 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 RPSAP08865 295 aaKnown RBP13.24□□□□□ -0.29
LSM1-201ENST00000311351 IGHV1-8P0DP01 117 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 MYL12AP19105 171 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 RAB3AP20336 220 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 MEF2CQ06413 473 aaPredicted RBP13.24□□□□□ -0.29
LSM1-201ENST00000311351 LY6EQ16553 131 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 LRRC75BQ2VPJ9 315 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 CCDC58Q4VC31 144 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 SAXO1Q8IYX7 474 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 C8orf59Q8N0T1 100 aaPredicted RBP13.24□□□□□ -0.29
LSM1-201ENST00000311351 ZFP41Q8N8Y5 198 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 ZSCAN4Q8NAM6 433 aaPredicted RBP13.24□□□□□ -0.29
LSM1-201ENST00000311351 OR5R1Q8NH85 324 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 LINC01006Q8NI28 216 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 GPR148Q8TDV2 347 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 GGHQ92820 318 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 ORAI1Q96D31 301 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 SMIM19Q96E16 107 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 TMEM80Q96HE8 168 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 SSX3Q99909 188 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 SLITRK2Q9H156 845 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 PPA2Q9H2U2 334 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 GLS2Q9UI32 602 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 LINC00312Q9Y6C7 94 aa13.24□□□□□ -0.29
LSM1-201ENST00000311351 hADV38S2A0JD32 116 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 ODF3BA8MYP8 253 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 H0YHG0 523 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 SH2D1BO14796 132 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 XPNPEP2O43895 674 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 RBP4P02753 201 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 ZNF44P15621 663 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 P2RX3P56373 397 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 KRTAP10-3P60369 221 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 SCN1BQ07699 218 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 ST3GAL4Q11206 333 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 PLA1AQ53H76 456 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 ZNF529Q6P280 563 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 TRAPPC6BQ86SZ2 158 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 DYNAPQ8N1N2 210 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 TMEM106AQ96A25 262 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 BABAM2Q9NXR7 383 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 NKX1-2Q9UD57 310 aaPredicted RBP13.23□□□□□ -0.29
LSM1-201ENST00000311351 BOLA1Q9Y3E2 137 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 RNF114Q9Y508 228 aa13.23□□□□□ -0.29
LSM1-201ENST00000311351 OGG1O15527 345 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 CLPXO76031 633 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 ARG1P05089 322 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 CD2P06729 351 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 LGALS4P56470 323 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 SLC34A1Q06495 639 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 AESQ08117 197 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 DOC2BQ14184 412 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 ATXN7L3Q14CW9 347 aaPredicted RBP13.22□□□□□ -0.29
LSM1-201ENST00000311351 LDLRAD2Q5SZI1 272 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 Q6P435 159 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 AHSA2Q719I0 299 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 SATL1Q86VE3 508 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 ZNF485Q8NCK3 441 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 OR13D1Q8NGV5 346 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 OR10K1Q8NGX5 313 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 OR52N1Q8NH53 320 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 PPP1R35Q8TAP8 253 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 TNFAIP8L1Q8WVP5 186 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 GPER1Q99527 375 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 FAM192AQ9GZU8 254 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 MEGF9Q9H1U4 602 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 ING3Q9NXR8 418 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 PCDHGB5Q9Y5G0 923 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 HSPE1-MOB4S4R3N1 261 aa13.22□□□□□ -0.29
LSM1-201ENST00000311351 WNK1Q9H4A3 2382 aa13.21□□□□□ -0.29
LSM1-201ENST00000311351 PNMA8CA0A1B0GUJ8 204 aa13.21□□□□□ -0.29
LSM1-201ENST00000311351 FAM90A8PA6NJQ4 464 aa13.21□□□□□ -0.29
LSM1-201ENST00000311351 SLC33A1O00400 549 aaPredicted RBP13.21□□□□□ -0.29
LSM1-201ENST00000311351 HSPB6O14558 160 aa13.21□□□□□ -0.29
LSM1-201ENST00000311351 MMP23AO75900 390 aa13.21□□□□□ -0.29
LSM1-201ENST00000311351 ERP29P30040 261 aaKnown RBP13.21□□□□□ -0.29
LSM1-201ENST00000311351 OR3A4PP47883 348 aa13.21□□□□□ -0.29
LSM1-201ENST00000311351 GLIPR1P48060 266 aa13.21□□□□□ -0.29
LSM1-201ENST00000311351 DYNC1I2Q13409 638 aaKnown RBP13.21□□□□□ -0.29
LSM1-201ENST00000311351 PRR31Q5SQ13 230 aa13.21□□□□□ -0.29
LSM1-201ENST00000311351 PRAMEF5Q5TYX0 476 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms