RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ZNF44P15621 663 aa14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 MGMTP16455 207 aa14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 AMY2BP19961 511 aa14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 SDC2P34741 201 aa14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 COL10A1Q03692 680 aa14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 IKZF1Q13422 519 aa14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 OR8H2Q8N162 312 aa14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 BATF2Q8N1L9 274 aa14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 ST8SIA4Q92187 359 aa14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 GFI1Q99684 422 aa14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 URM1Q9BTM9 101 aaKnown RBP14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 HIF1ANQ9NWT6 349 aa14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 F8P00451 2351 aa14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 NOL3O60936 208 aaKnown RBP14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 ZNF737O75373 536 aa14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 OR2H2O95918 312 aa14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 TK1P04183 234 aa14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 ZNF16P17020 682 aaPredicted RBP14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 NDUFB7P17568 137 aa14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 GABRR1P24046 479 aa14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 SEC61A1P61619 476 aaKnown RBP14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 LCN2P80188 198 aa14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 ZNRF1Q8ND25 227 aa14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 OR10K1Q8NGX5 313 aa14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 C8orf46Q8TAG6 207 aa14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 RAB2BQ8WUD1 216 aa14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 RAB40AQ8WXH6 277 aa14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 SLC25A28Q96A46 364 aa14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 PTX4Q96A99 478 aa14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 FAM3DQ96BQ1 224 aa14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 TMEM59Q9BXS4 323 aa14.86□□□□□ -0.03
SSSCA1-201ENST00000309328 ZANQ9Y493 2812 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 ACANP16112 2415 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 IGHV2-70DA0A0C4DH43 119 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 SHISA3A0PJX4 238 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 A8MV72 311 aaPredicted RBP14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 TMEM14DPA8MWL7 114 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 MGST3O14880 152 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 PHF1O43189 567 aaPredicted RBP14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 OR7C1O76099 320 aaPredicted RBP14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 GLAP06280 429 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 VSIG8P0DPA2 414 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 ZFP36P26651 326 aaKnown RBP14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 ERP29P30040 261 aaKnown RBP14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 PAX5Q02548 391 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 KRTAP1-1Q07627 177 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 DCAF12L2Q5VW00 463 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 SFXN4Q6P4A7 337 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 BTN2A1Q7KYR7 527 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 GDPD3Q7L5L3 318 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 Q96M66 194 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 SELENOIQ9C0D9 397 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 IL36RNQ9UBH0 155 aa14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 RPUSD1Q9UJJ7 312 aaKnown RBP14.85□□□□□ -0.03
SSSCA1-201ENST00000309328 KIR2DS1A0A191URI9 304 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 LY6G6DO95868 133 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 PPIAL4GP0DN37 164 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 HNF1AP20823 631 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 DUSP1P28562 367 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 TMBIM6P55061 237 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 OR10A3P58181 314 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 RPS27AP62979 156 aaKnown RBP14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 RBM39Q14498 530 aaKnown RBP14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 GRK1Q15835 563 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 PIGYQ3MUY2 71 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 GPR107Q5VW38 600 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 Q6P435 159 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 USP43Q70EL4 1123 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 CMTM4Q8IZR5 234 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 NKX3-1Q99801 234 aaPredicted RBP14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 NUDT16L1Q9BRJ7 211 aaKnown RBP14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 DCTN5Q9BTE1 182 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 TM2D1Q9BX74 207 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 LPAR2Q9HBW0 351 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 RAB22AQ9UL26 194 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 INSIG2Q9Y5U4 225 aa14.84□□□□□ -0.03
SSSCA1-201ENST00000309328 A0A0G2JK05 382 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 SLC33A1O00400 549 aaPredicted RBP14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 GEMIN2O14893 280 aaKnown RBP14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 SCGNO76038 276 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 MPIG6BO95866 241 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 CALCBP10092 127 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 RAB6AP20340 208 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 CEBPDP49716 269 aaPredicted RBP14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 SNU13P55769 128 aaKnown RBP14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 QRFPP83859 136 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 PAX2Q02962 417 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 MEF2CQ06413 473 aaPredicted RBP14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 P2RY14Q15391 338 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 PAN3Q58A45 887 aaKnown RBP14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 HES5Q5TA89 166 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 C17orf107Q6ZR85 190 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 SLC16A12Q6ZSM3 486 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 KIR3DL3Q8N743 410 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 TMEM104Q8NE00 496 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 H1FXQ92522 213 aaKnown RBP14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 DACT3Q96B18 629 aaPredicted RBP14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 BARHL1Q9BZE3 327 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 SHARPINQ9H0F6 387 aa14.83□□□□□ -0.04
SSSCA1-201ENST00000309328 NCOR1P1Q9H4R4 102 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 1162.9 ms