RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 OR5AK2Q8NH90 309 aa16.05■□□□□ 0.16
PDZRN3-202ENST00000308537 DCLRE1BQ9H816 532 aa16.05■□□□□ 0.16
PDZRN3-202ENST00000308537 LINC00312Q9Y6C7 94 aa16.05■□□□□ 0.16
PDZRN3-202ENST00000308537 VGLL3A8MV65 326 aa16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 SULT1B1O43704 296 aa16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 CHST1O43916 411 aa16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 MMP23AO75900 390 aa16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 OR2H2O95918 312 aa16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 CCDC159P0C7I6 412 aa16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 DCKP27707 260 aa16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 ERP29P30040 261 aaKnown RBP16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 TGFBR2P37173 567 aa16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 SNU13P55769 128 aaKnown RBP16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 DOC2BQ14184 412 aa16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 EDDM3AQ14507 147 aa16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 KISS1Q15726 138 aa16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 GRK1Q15835 563 aa16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 TTC23Q5W5X9 447 aa16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 DHRS7BQ6IAN0 325 aaPredicted RBP16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 SERPINA12Q8IW75 414 aa16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 ZNF714Q96N38 554 aa16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 CLEC2DQ9UHP7 191 aa16.04■□□□□ 0.16
PDZRN3-202ENST00000308537 ANKRD65E5RJM6 399 aa16.03■□□□□ 0.16
PDZRN3-202ENST00000308537 SIRPB1O00241 398 aa16.03■□□□□ 0.16
PDZRN3-202ENST00000308537 MGST3O14880 152 aa16.03■□□□□ 0.16
PDZRN3-202ENST00000308537 GBX2P52951 348 aaPredicted RBP16.03■□□□□ 0.16
PDZRN3-202ENST00000308537 SLC35E4Q6ICL7 350 aa16.03■□□□□ 0.16
PDZRN3-202ENST00000308537 PPA2Q9H2U2 334 aa16.03■□□□□ 0.16
PDZRN3-202ENST00000308537 DIMT1Q9UNQ2 313 aaKnown RBP16.03■□□□□ 0.16
PDZRN3-202ENST00000308537 GSTK1Q9Y2Q3 226 aa16.03■□□□□ 0.16
PDZRN3-202ENST00000308537 hCG_1809904A0A1W2PP81 198 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 A0A1W2PPE2 198 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 A0A1W2PR64 198 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 A0A1W2PRV1 198 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 hADV38S2A0JD32 116 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 BTBD17A6NE02 478 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 OGG1O15527 345 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 CYB5AP00167 134 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 GABRR1P24046 479 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 P2RX3P56373 397 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 LY6EQ16553 131 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 CCDC58Q4VC31 144 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 TREML4Q6UXN2 200 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 BAIAP2L2Q6UXY1 529 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 SETD9Q8NE22 299 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 Q8NFD4 153 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 OR5D14Q8NGL3 314 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 HAVCR2Q8TDQ0 301 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 COQ2Q96H96 371 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 RHOFQ9HBH0 211 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 FBLN5Q9UBX5 448 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 DHDHQ9UQ10 334 aa16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 TBL2Q9Y4P3 447 aaKnown RBP16.02■□□□□ 0.16
PDZRN3-202ENST00000308537 A0A0G2JK05 382 aa16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 ERICH4A6NGS2 130 aa16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 SLC33A1O00400 549 aaPredicted RBP16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 GABRPO00591 440 aa16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 CASQ2O14958 399 aaPredicted RBP16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 RPSAP08865 295 aaKnown RBP16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 GNAO1P09471 354 aa16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 JUNBP17275 347 aaPredicted RBP16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 GDNFP39905 211 aa16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 OGFRL1Q5TC84 451 aaPredicted RBP16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 ELP2Q6IA86 826 aa16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 RPL22L1Q6P5R6 122 aaKnown RBP16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 CCBE1Q6UXH8 406 aaPredicted RBP16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 ASCL4Q6XD76 172 aa16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 DHRSXQ8N5I4 330 aa16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 FBLIM1Q8WUP2 373 aa16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 CYGBQ8WWM9 190 aa16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 NKX3-1Q99801 234 aaPredicted RBP16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 EXOSC4Q9NPD3 245 aaKnown RBP16.01■□□□□ 0.15
PDZRN3-202ENST00000308537 ARG1P05089 322 aa16■□□□□ 0.15
PDZRN3-202ENST00000308537 CSN2P05814 226 aa16■□□□□ 0.15
PDZRN3-202ENST00000308537 GLIPR1P48060 266 aa16■□□□□ 0.15
PDZRN3-202ENST00000308537 SOX2P48431 317 aa16■□□□□ 0.15
PDZRN3-202ENST00000308537 EFNB2P52799 333 aa16■□□□□ 0.15
PDZRN3-202ENST00000308537 RPS11P62280 158 aaKnown RBP eCLIP16■□□□□ 0.15
PDZRN3-202ENST00000308537 UTF1Q5T230 341 aa16■□□□□ 0.15
PDZRN3-202ENST00000308537 BRICD5Q6PL45 260 aa16■□□□□ 0.15
PDZRN3-202ENST00000308537 PXT1Q8NFP0 134 aa16■□□□□ 0.15
PDZRN3-202ENST00000308537 OR13D1Q8NGV5 346 aa16■□□□□ 0.15
PDZRN3-202ENST00000308537 TSEN15Q8WW01 171 aaKnown RBP16■□□□□ 0.15
PDZRN3-202ENST00000308537 GGHQ92820 318 aa16■□□□□ 0.15
PDZRN3-202ENST00000308537 CORO2AQ92828 525 aa16■□□□□ 0.15
PDZRN3-202ENST00000308537 ORAI1Q96D31 301 aa16■□□□□ 0.15
PDZRN3-202ENST00000308537 TAS2R4Q9NYW5 299 aa16■□□□□ 0.15
PDZRN3-202ENST00000308537 SIGLEC9Q9Y336 463 aa16■□□□□ 0.15
PDZRN3-202ENST00000308537 SESN1Q9Y6P5 492 aa16■□□□□ 0.15
PDZRN3-202ENST00000308537 PRKDCP78527 4128 aaKnown RBP15.99■□□□□ 0.15
PDZRN3-202ENST00000308537 IGHV2-26A0A0B4J1V2 119 aa15.99■□□□□ 0.15
PDZRN3-202ENST00000308537 IRGMA1A4Y4 181 aa15.99■□□□□ 0.15
PDZRN3-202ENST00000308537 SH2D1BO14796 132 aa15.99■□□□□ 0.15
PDZRN3-202ENST00000308537 HCKP08631 526 aa15.99■□□□□ 0.15
PDZRN3-202ENST00000308537 KIR2DS4P43632 304 aa15.99■□□□□ 0.15
PDZRN3-202ENST00000308537 RAB13P51153 203 aa15.99■□□□□ 0.15
PDZRN3-202ENST00000308537 AESQ08117 197 aa15.99■□□□□ 0.15
PDZRN3-202ENST00000308537 DMKNQ6E0U4 476 aaPredicted RBP15.99■□□□□ 0.15
PDZRN3-202ENST00000308537 OR51T1Q8NGJ9 327 aa15.99■□□□□ 0.15
PDZRN3-202ENST00000308537 OR4P4Q8NGL7 312 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms