RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 MMP7P09237 267 aaPredicted RBP7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 GAB4Q2WGN9 574 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 WIPI1Q5MNZ9 446 aaPredicted RBP7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 Q6ZN92 141 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 SH2D5Q6ZV89 423 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 UBALD1Q8TB05 177 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 ZNF416Q9BWM5 594 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 GHITMQ9H3K2 345 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 ZDHHC11Q9H8X9 412 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 IGHV3-15A0A0B4J1V0 119 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 DCTN6O00399 190 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 UBE2L6O14933 153 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 NUPL2O15504 423 aaKnown RBP7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 CBR1P16152 277 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 CCKARP32238 428 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 GNG10P50151 68 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 HCCSP53701 268 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 PIGPP57054 158 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 TOR2AQ5JU69 321 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 RPUSD3Q6P087 351 aaKnown RBP7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 CRIPAKQ8N1N5 446 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 SCARB1Q8WTV0 552 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 KCNK15Q9H427 330 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 FAM60AQ9NP50 221 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 UFC1Q9Y3C8 167 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 OR3A4PP47883 348 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 LSAMPQ13449 338 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 SLC17A1Q14916 467 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 CCDC190Q86UF4 302 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 ADGRG7Q96K78 797 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 NPAS1Q99742 590 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 DNAJB12Q9NXW2 375 aaKnown RBP7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 NDUFA2O43678 99 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 CPN1P15169 458 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 HNRNPA3P51991 378 aaKnown RBP7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 BTN1A1Q13410 526 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 KIRREL2Q6UWL6 708 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 LYSMD2Q8IV50 215 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 PCNPQ8WW12 178 aaKnown RBP7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 DOK1Q99704 481 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 SMOC1Q9H4F8 434 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 ELOVL5Q9NYP7 299 aa7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 ZMAT5Q9UDW3 170 aaKnown RBP7.39□□□□□ -1.23
PCDHB1-201ENST00000306549 RFPL4AA6NLU0 287 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 RFPL4AL1F8VTS6 287 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 SPATA46Q5T0L3 261 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 SPINK14Q6IE38 97 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 SLC25A42Q86VD7 318 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 TMEM123Q8N131 208 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 OR4S1Q8NGB4 309 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 PRSS3P2Q8NHM4 247 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 PLA2G3Q9NZ20 509 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 B9D1Q9UPM9 204 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 DSCAMO60469 2012 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 ZFHX2Q9C0A1 2572 aaPredicted RBP7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 GREM1O60565 184 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 SSX1Q16384 188 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 ZFP62Q8NB50 900 aaPredicted RBP7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 BLNKQ8WV28 456 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 PERPQ96FX8 193 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 TEX37Q96LM6 180 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 ZNF426Q9BUY5 554 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 MOB4Q9Y3A3 225 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 TMEM235A6NFC5 223 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 DHRS3O75911 302 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 ZNF121P58317 390 aaPredicted RBP7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 RELBQ01201 579 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 FBXW9Q5XUX1 488 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 CORO6Q6QEF8 472 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 ACOT7LQ6ZUV0 252 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 C10orf90Q96M02 699 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 NME2P1O60361 137 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 ATF1P18846 271 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 RPL12P30050 165 aaKnown RBP7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 C19orf57Q0VDD7 668 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 C19orf54Q5BKX5 351 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 FNDC7Q5VTL7 733 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 PET117Q6UWS5 81 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 MED13LQ71F56 2210 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 COL4A6Q14031 1691 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 TMEM210A6NLX4 147 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 C9orf172C9J069 976 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 ADAM20O43506 726 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 FUT3P21217 361 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 YBX1P67809 324 aaKnown RBP7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 MAVSQ7Z434 540 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 UBE2FQ969M7 185 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 CXXC4Q9H2H0 198 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 AUP1Q9Y679 476 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 GNG7O60262 68 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 NGFP01138 241 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 CTSSP25774 331 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 HTR1DP28221 377 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 ZNF154Q13106 437 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 FZD5Q13467 585 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 RIPPLY2Q5TAB7 128 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 NECAP1Q8NC96 275 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 TMEM116Q8NCL8 245 aa7.38□□□□□ -1.23
PCDHB1-201ENST00000306549 IGHV1-45A0A0A0MS14 117 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms