RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 OOEPA6NGQ2 149 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 TRIM64CA6NLI5 447 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 FAM157AC9JC47 383 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 RFX2P48378 723 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 IGFL3Q6UXB1 125 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 ZNF75AQ96N20 296 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 RTN4RQ9BZR6 473 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 ZDHHC11Q9H8X9 412 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 RBFOX1Q9NWB1 397 aaKnown RBP8.01□□□□□ -1.13
PTPRE-202ENST00000306042 GEMIN2O14893 280 aaKnown RBP8.01□□□□□ -1.13
PTPRE-202ENST00000306042 CT45A6P0DMU7 189 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 CT45A5P0DMU8 189 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 CT45A7P0DMV0 189 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 ERP29P30040 261 aaKnown RBP8.01□□□□□ -1.13
PTPRE-202ENST00000306042 CAMLGP49069 296 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 ZNF816Q0VGE8 651 aaPredicted RBP8.01□□□□□ -1.13
PTPRE-202ENST00000306042 PLA2G7Q13093 441 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 Q3ZCU0 254 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 PRR30Q53SZ7 412 aaPredicted RBP8.01□□□□□ -1.13
PTPRE-202ENST00000306042 CT45A1Q5HYN5 189 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 CT45A3Q8NHU0 189 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 SMIM3Q9BZL3 60 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 NMNAT2Q9BZQ4 307 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 PCNX1Q96RV3 2341 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 ARPC5O15511 151 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 CD3DP04234 171 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 CCR6P51684 374 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 MRPS11P82912 194 aaKnown RBP8.01□□□□□ -1.13
PTPRE-202ENST00000306042 FOXF2Q12947 444 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 NRN1LQ496H8 165 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 FAM76BQ5HYJ3 339 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 CCDC144NLQ6NUI1 221 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 ZNF826PQ6ZT77 177 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 RFPL4BQ6ZWI9 263 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 PINX1Q96BK5 328 aaKnown RBP8.01□□□□□ -1.13
PTPRE-202ENST00000306042 ADAT3Q96EY9 351 aaPredicted RBP8.01□□□□□ -1.13
PTPRE-202ENST00000306042 DHRS9Q9BPW9 319 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 HES4Q9HCC6 221 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 TREM1Q9NP99 234 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 MRPL22Q9NWU5 206 aaKnown RBP8.01□□□□□ -1.13
PTPRE-202ENST00000306042 IGHV2OR16-5A0A0B4J2B6 119 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 CA11O75493 328 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 TCRBP04435 133 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 ANXA7P20073 488 aaKnown RBP8.01□□□□□ -1.13
PTPRE-202ENST00000306042 MST1P26927 711 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 SNRPNP63162 240 aaKnown RBP8.01□□□□□ -1.13
PTPRE-202ENST00000306042 ATPAF1Q5TC12 328 aaPredicted RBP8.01□□□□□ -1.13
PTPRE-202ENST00000306042 ZBTB37Q5TC79 503 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 TMEM65Q6PI78 240 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 GPX8Q8TED1 209 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 YIPF6Q96EC8 236 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 MAP6Q96JE9 813 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 ZNF488Q96MN9 340 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 TSNAXQ99598 290 aaKnown RBP8.01□□□□□ -1.13
PTPRE-202ENST00000306042 DOCK9Q9BZ29 2069 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 CACNA1AO00555 2505 aa8.01□□□□□ -1.13
PTPRE-202ENST00000306042 A6NHS1 94 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 GPR31O00270 319 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 CYB5R3P00387 301 aaPredicted RBP8□□□□□ -1.13
PTPRE-202ENST00000306042 SMIM18P0DKX4 95 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 PI3P19957 117 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 TGFBR1P36897 503 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 CDKN1AP38936 164 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 RRAS2P62070 204 aaPredicted RBP8□□□□□ -1.13
PTPRE-202ENST00000306042 ROM1Q03395 351 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 COL10A1Q03692 680 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 RTN4IP1Q8WWV3 396 aaPredicted RBP8□□□□□ -1.13
PTPRE-202ENST00000306042 ERGIC1Q969X5 290 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 CNTNAP3Q9BZ76 1288 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 TINAGL1Q9GZM7 467 aaPredicted RBP8□□□□□ -1.13
PTPRE-202ENST00000306042 AUNIPQ9H7T9 357 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 INSIG2Q9Y5U4 225 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 FANCMQ8IYD8 2048 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 SEMG1P04279 462 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 EVX1P49640 407 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 SLC35B1P78383 322 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 H3F3CQ6NXT2 135 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 RHOUQ7L0Q8 258 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 TGIF2LYQ8IUE0 185 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 TGIF2LXQ8IUE1 241 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 GRPEL2Q8TAA5 225 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 CD300LFQ8TDQ1 290 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 SEC22AQ96IW7 307 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 C17orf112F2Z3M2 114 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 K7EPK0 472 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 MGST3O14880 152 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 FCGR3BO75015 233 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 PIGPP57054 158 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 BAMBIQ13145 260 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 TMEM268Q5VZI3 342 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 FAM71E2Q8N5Q1 922 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 HPSE2Q8WWQ2 592 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 OR2D2Q9H210 308 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 ZNF230Q9UIE0 474 aaPredicted RBP8□□□□□ -1.13
PTPRE-202ENST00000306042 KIF26AQ9ULI4 1882 aaPredicted RBP8□□□□□ -1.13
PTPRE-202ENST00000306042 AKAP6Q13023 2319 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 ARPC4-TTLL3A0A0A6YYG9 625 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 IGHG3P01860 377 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 SCAND1P57086 179 aa8□□□□□ -1.13
PTPRE-202ENST00000306042 BAXQ07812 192 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms