RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 CYTIPO60759 359 aa11.74□□□□□ -0.53
BCCIP-202ENST00000299130 CRYBA1P05813 215 aa11.74□□□□□ -0.53
BCCIP-202ENST00000299130 CELA3AP09093 270 aa11.74□□□□□ -0.53
BCCIP-202ENST00000299130 PRKACAP17612 351 aa11.74□□□□□ -0.53
BCCIP-202ENST00000299130 CCNOP22674 350 aa11.74□□□□□ -0.53
BCCIP-202ENST00000299130 HOXA6P31267 233 aa11.74□□□□□ -0.53
BCCIP-202ENST00000299130 TMEM105Q8N8V8 129 aa11.74□□□□□ -0.53
BCCIP-202ENST00000299130 CT55Q8WUE5 264 aa11.74□□□□□ -0.53
BCCIP-202ENST00000299130 HPSE2Q8WWQ2 592 aa11.74□□□□□ -0.53
BCCIP-202ENST00000299130 RSRP1Q9BUV0 290 aa11.74□□□□□ -0.53
BCCIP-202ENST00000299130 SCRT1Q9BWW7 348 aa11.74□□□□□ -0.53
BCCIP-202ENST00000299130 SUCNR1Q9BXA5 334 aa11.74□□□□□ -0.53
BCCIP-202ENST00000299130 IL36RNQ9UBH0 155 aa11.74□□□□□ -0.53
BCCIP-202ENST00000299130 KLF2Q9Y5W3 355 aaPredicted RBP11.74□□□□□ -0.53
BCCIP-202ENST00000299130 ZNF503-AS2A6NEH8 195 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 PCP4L1A6NKN8 68 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 YKT6O15498 198 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 BCL3P20749 454 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 FUT3P21217 361 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 RPL35P42766 123 aaKnown RBP11.73□□□□□ -0.53
BCCIP-202ENST00000299130 DVL1P1P54792 670 aaPredicted RBP11.73□□□□□ -0.53
BCCIP-202ENST00000299130 FOXO1Q12778 655 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 LPAL2Q16609 132 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 MIDNQ504T8 468 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 FAM76BQ5HYJ3 339 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 RIPPLY2Q5TAB7 128 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 FBXW12Q6X9E4 464 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 C2CD4CQ8TF44 421 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 PSMF1Q92530 271 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 SLAMF9Q96A28 289 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 C1QTNF5Q9BXJ0 243 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 ESRP2Q9H6T0 727 aaKnown RBP11.73□□□□□ -0.53
BCCIP-202ENST00000299130 SLC7A10Q9NS82 523 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 WDFY4Q6ZS81 3184 aa11.73□□□□□ -0.53
BCCIP-202ENST00000299130 GPR137BO60478 399 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 PPYP01298 95 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 SPP1P10451 314 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 PPT1P50897 306 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 DUSP3P51452 185 aaPredicted RBP11.72□□□□□ -0.53
BCCIP-202ENST00000299130 PCBD1P61457 104 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 ARF1P84077 181 aaKnown RBP11.72□□□□□ -0.53
BCCIP-202ENST00000299130 SWI5Q1ZZU3 235 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 LGI3Q8N145 548 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 OR56B2PQ8NGI1 322 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 SPSB4Q96A44 273 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 USB1Q9BQ65 265 aaKnown RBP11.72□□□□□ -0.53
BCCIP-202ENST00000299130 HES7Q9BYE0 225 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 RGCCQ9H4X1 137 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 CACFD1Q9UGQ2 172 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 ZNF175Q9Y473 711 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 FREM1Q5H8C1 2179 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 NKX2-6A6NCS4 301 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 COLCA2A8K830 154 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 DANCRP0C864 163 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 DUSP1P28562 367 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 GNRHRP30968 328 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 KCNJ3P48549 501 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 CYB561P49447 251 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 RAB13P51153 203 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 ZNF616Q08AN1 781 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 TMEM211Q6ICI0 200 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 HSD17B11Q8NBQ5 300 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 OR4D5Q8NGN0 318 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 PAPOLGQ9BWT3 736 aaKnown RBP11.72□□□□□ -0.53
BCCIP-202ENST00000299130 PRRG4Q9BZD6 226 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 ZNF391Q9UJN7 358 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 CELSR3Q9NYQ7 3312 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 COL6A3P12111 3177 aa11.72□□□□□ -0.53
BCCIP-202ENST00000299130 DOCK10Q96BY6 2186 aa11.71□□□□□ -0.53
BCCIP-202ENST00000299130 HSPB6O14558 160 aa11.71□□□□□ -0.53
BCCIP-202ENST00000299130 TSPAN15O95858 294 aa11.71□□□□□ -0.53
BCCIP-202ENST00000299130 HLA-HP01893 362 aa11.71□□□□□ -0.53
BCCIP-202ENST00000299130 HEXAP06865 529 aa11.71□□□□□ -0.53
BCCIP-202ENST00000299130 SNCAP37840 140 aa11.71□□□□□ -0.53
BCCIP-202ENST00000299130 AKR1D1P51857 326 aa11.71□□□□□ -0.53
BCCIP-202ENST00000299130 UCP3P55916 312 aa11.71□□□□□ -0.53
BCCIP-202ENST00000299130 HERV-K104P61576 105 aa11.71□□□□□ -0.53
BCCIP-202ENST00000299130 PEAR1Q5VY43 1037 aaPredicted RBP11.71□□□□□ -0.53
BCCIP-202ENST00000299130 SUMF1Q8NBK3 374 aa11.71□□□□□ -0.53
BCCIP-202ENST00000299130 EXTL1Q92935 676 aa11.71□□□□□ -0.53
BCCIP-202ENST00000299130 GINS3Q9BRX5 216 aa11.71□□□□□ -0.53
BCCIP-202ENST00000299130 PARPBPQ9NWS1 579 aa11.71□□□□□ -0.53
BCCIP-202ENST00000299130 NOSIPQ9Y314 301 aaKnown RBP11.71□□□□□ -0.53
BCCIP-202ENST00000299130 COL27A1Q8IZC6 1860 aaPredicted RBP11.71□□□□□ -0.53
BCCIP-202ENST00000299130 TMEM265A0A087WTH1 108 aa11.71□□□□□ -0.54
BCCIP-202ENST00000299130 C3orf85A0A1B0GTC6 90 aa11.71□□□□□ -0.54
BCCIP-202ENST00000299130 A0A1B0GV50 99 aa11.71□□□□□ -0.54
BCCIP-202ENST00000299130 MPPED1O15442 326 aa11.71□□□□□ -0.54
BCCIP-202ENST00000299130 ST8SIA3O43173 380 aa11.71□□□□□ -0.54
BCCIP-202ENST00000299130 GLAP06280 429 aa11.71□□□□□ -0.54
BCCIP-202ENST00000299130 SCTP09683 121 aa11.71□□□□□ -0.54
BCCIP-202ENST00000299130 GLP1RP43220 463 aa11.71□□□□□ -0.54
BCCIP-202ENST00000299130 P2RY1P47900 373 aa11.71□□□□□ -0.54
BCCIP-202ENST00000299130 GPM6AP51674 278 aa11.71□□□□□ -0.54
BCCIP-202ENST00000299130 PEA15Q15121 130 aa11.71□□□□□ -0.54
BCCIP-202ENST00000299130 DCAF12Q5T6F0 453 aa11.71□□□□□ -0.54
BCCIP-202ENST00000299130 COLCA1Q6ZS62 124 aa11.71□□□□□ -0.54
BCCIP-202ENST00000299130 CPNE4Q96A23 557 aaPredicted RBP11.71□□□□□ -0.54
BCCIP-202ENST00000299130 CLCC1Q96S66 551 aa11.71□□□□□ -0.54
BCCIP-202ENST00000299130 CDX2Q99626 313 aaPredicted RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms