RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 FAM222BQ8WU58 562 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 CHPT1Q8WUD6 406 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 PP6455Q8WZ26 134 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 ZNF286AQ9HBT8 521 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 NKX2-6A6NCS4 301 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 NDUFB3O43676 98 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 CD37P11049 281 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 HOXA1P49639 335 aaPredicted RBP7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 TMEM42Q69YG0 159 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 ADAM5Q6NVV9 412 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 SLC36A1Q7Z2H8 476 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 TCTEX1D2Q8WW35 142 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 WFIKKN1Q96NZ8 548 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 OR51E2Q9H255 320 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 GPR84Q9NQS5 396 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 NLKQ9UBE8 527 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 M0R233 179 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 CST4P01036 141 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 CELA3BP08861 270 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 ACTBP60709 375 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 PPP1CBP62140 327 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 MICBQ29980 383 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 BEX5Q5H9J7 111 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 AGAP6Q5VW22 663 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 ANGPTL5Q86XS5 388 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 CMTM4Q8IZR5 234 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 NKAIN3Q8N8D7 197 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 SEMA6DQ8NFY4 1073 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 OR4A16Q8NH70 328 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 SPOCK3Q9BQ16 436 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 EIF5A2Q9GZV4 153 aaKnown RBP7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 ARL6Q9H0F7 186 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 MGAQ8IWI9 3026 aa7.24□□□□□ -1.25
PTPDC1-201ENST00000288976 ANGPTL7O43827 346 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 CALCRP30988 508 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 EVX1P49640 407 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 CCL8P80075 99 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 CLEC2AQ6UVW9 174 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 C12orf43Q96C57 262 aaKnown RBP7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 BARX1Q9HBU1 254 aaPredicted RBP7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 V9GY05 133 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 ATMQ13315 3056 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 ZNF320A2RRD8 509 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 IQCF6A8MYZ5 107 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 GNG10P50151 68 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 FAM3AP98173 230 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 DAZAP2Q15038 168 aaPredicted RBP7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 PAQR4Q8N4S7 273 aaPredicted RBP7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 MSI2Q96DH6 328 aaKnown RBP7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 RAB3CQ96E17 227 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 TMEM204Q9BSN7 226 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 MRI1Q9BV20 369 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 CHST5Q9GZS9 411 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 MS4A7Q9GZW8 240 aaPredicted RBP7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 ZCCHC4Q9H5U6 513 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 ZNF319Q9P2F9 582 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 CREBL2O60519 120 aaPredicted RBP7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 MT-CO2P00403 227 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 SCAND1P57086 179 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 OR51D1Q8NGF3 324 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 FOXRED1Q96CU9 486 aaPredicted RBP7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 OR14A2Q96R54 314 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 LIN7BQ9HAP6 207 aa7.23□□□□□ -1.25
PTPDC1-201ENST00000288976 ZNF816-ZNF321PA0A0X1KG74 233 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 HMGB3O15347 200 aaKnown RBP7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 RGS11O94810 467 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 ZNF250P15622 560 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 BDKRB2P30411 391 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 GLRXP35754 106 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 MPPED2Q15777 294 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 CLVS2Q5SYC1 327 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 PRAMEF5Q5TYX0 476 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 PRAMEF6Q5VXH4 476 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 Q6ZTK2 550 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 MS4A3Q96HJ5 214 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 NPDC1Q9NQX5 325 aaPredicted RBP7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 PLA2G2AP14555 144 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 NR4A2P43354 598 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 NPBWR1P48145 328 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 GK2Q14410 553 aaPredicted RBP7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 RFPL4BQ6ZWI9 263 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 TMEM104Q8NE00 496 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 SYNPRQ8TBG9 265 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 DVL3Q92997 716 aaPredicted RBP7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 MARS2Q96GW9 593 aaKnown RBP7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 CENPOQ9BU64 300 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 CYSLTR2Q9NS75 346 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 POLDIP2Q9Y2S7 368 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 TMPRSS2O15393 492 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 ZG16O60844 167 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 TOX4O94842 621 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 SRMP19623 302 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 CA6P23280 308 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 RBP2P50120 134 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 TNFAIP6P98066 277 aaPredicted RBP7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 LRRC10Q5BKY1 277 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 OR10K2Q6IF99 312 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 LINC00299Q6ZSB3 139 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 BEST4Q8NFU0 473 aa7.22□□□□□ -1.25
PTPDC1-201ENST00000288976 MAFIPQ8WZ33 124 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms