RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 TOX3O15405 576 aaPredicted RBP13.83□□□□□ -0.2
SMAD6-201ENST00000288840 ZIC3O60481 467 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 CLEC12BQ2HXU8 276 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 LCN15Q6UWW0 184 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 FAM24BQ8N5W8 94 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 ZNF107Q9UII5 783 aaPredicted RBP13.83□□□□□ -0.2
SMAD6-201ENST00000288840 TCFL5Q9UL49 500 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 MMP24Q9Y5R2 645 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 ACACAQ13085 2346 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 OR6C6A6NF89 314 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 OR6C65A6NJZ3 312 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 HMGB3O15347 200 aaKnown RBP13.83□□□□□ -0.2
SMAD6-201ENST00000288840 ADAM20O43506 726 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 ZXDAP98168 799 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 GUK1Q16774 197 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 OR8G2PQ6IF36 304 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 SPIN2AQ99865 258 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 SPIN2BQ9BPZ2 258 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 OCSTAMPQ9BR26 566 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 CHRNA10Q9GZZ6 450 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 SMCO4Q9NRQ5 59 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 SLC2A8Q9NY64 477 aa13.83□□□□□ -0.2
SMAD6-201ENST00000288840 CD300LBA8K4G0 201 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 CRYBA1P05813 215 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 MELTFP08582 738 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 CA6P23280 308 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 FUT6P51993 359 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 SLC23A3Q6PIS1 610 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 ZNF808Q8N4W9 903 aaPredicted RBP13.82□□□□□ -0.2
SMAD6-201ENST00000288840 OR52M1Q8NGK5 317 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 RXFP4Q8TDU9 374 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 OBP2BQ9NPH6 170 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 TMEM38BQ9NVV0 291 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 DENND4AQ7Z401 1863 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 RAB19A4D1S5 217 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 NKX2-6A6NCS4 301 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 PDCD6O75340 191 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 ELLP55199 621 aaPredicted RBP13.82□□□□□ -0.2
SMAD6-201ENST00000288840 PRDX4Q13162 271 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 EDEM2Q9BV94 578 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 LOC390937A0A1W2PQ73 354 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 TTLL8A6PVC2 850 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 FCGR3AP08637 254 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 COX6A1P12074 109 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 BCL3P20749 454 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 MAGEA5P43359 124 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 SUCLG1P53597 346 aaKnown RBP13.82□□□□□ -0.2
SMAD6-201ENST00000288840 FLI1Q01543 452 aaPredicted RBP13.82□□□□□ -0.2
SMAD6-201ENST00000288840 DHRS13Q6UX07 377 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 TMPRSS7Q7RTY8 843 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 SLC7A10Q9NS82 523 aa13.82□□□□□ -0.2
SMAD6-201ENST00000288840 ZNF724A8MTY0 619 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 SRSF10O75494 262 aaKnown RBP13.81□□□□□ -0.2
SMAD6-201ENST00000288840 SPP1P10451 314 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 PTGDSP41222 190 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 WDR5BQ86VZ2 330 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 SH3BGRL3Q9H299 93 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 CDH20Q9HBT6 801 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 SPTBN5Q9NRC6 3674 aaKnown RBP13.81□□□□□ -0.2
SMAD6-201ENST00000288840 APC2O95996 2303 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 PMS2P1A4D2B8 440 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 TAAR5O14804 337 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 CELA3AP09093 270 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 ZNF708P17019 499 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 CSRP1P21291 193 aaKnown RBP13.81□□□□□ -0.2
SMAD6-201ENST00000288840 MECP2P51608 486 aaKnown RBP13.81□□□□□ -0.2
SMAD6-201ENST00000288840 UBE2KP61086 200 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 SUPT4H1P63272 117 aaKnown RBP13.81□□□□□ -0.2
SMAD6-201ENST00000288840 CLN3Q13286 438 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 FAM27BQ5VT28 67 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 SLC35G3Q8N808 338 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 FGFBP3Q8TAT2 258 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 SMCO3A2RU48 225 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 MBPP02686 304 aaPredicted RBP13.81□□□□□ -0.2
SMAD6-201ENST00000288840 GLAP06280 429 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 UMODP07911 640 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 THNSL2Q86YJ6 484 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 OR5C1Q8NGR4 320 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 CT55Q8WUE5 264 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 OR2H1Q9GZK4 316 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 CCL28Q9NRJ3 127 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 IL36RNQ9UBH0 155 aa13.81□□□□□ -0.2
SMAD6-201ENST00000288840 ERRFI1Q9UJM3 462 aaPredicted RBP13.81□□□□□ -0.2
SMAD6-201ENST00000288840 hCG_1809904A0A1W2PP81 198 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 A0A1W2PR64 198 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 A0A1W2PRV1 198 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 DNASE2O00115 360 aaPredicted RBP13.8□□□□□ -0.2
SMAD6-201ENST00000288840 NXPH2O95156 264 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 IL2RAP01589 272 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 CTSDP07339 412 aaPredicted RBP13.8□□□□□ -0.2
SMAD6-201ENST00000288840 CALCRP30988 508 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 SRD5A2P31213 254 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 RUNX1Q01196 453 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 MYPOPQ86VE0 399 aaPredicted RBP13.8□□□□□ -0.2
SMAD6-201ENST00000288840 MRGPRFQ96AM1 343 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 CLCC1Q96S66 551 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 NRIP2Q9BQI9 281 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 IGHV3-13P01766 116 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 IGHV3-7P01780 117 aa13.8□□□□□ -0.2
SMAD6-201ENST00000288840 SCTP09683 121 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms