RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 RAB1CQ92928 201 aa18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 S100A16Q96FQ6 103 aaKnown RBP18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 IFT22Q9H7X7 185 aa18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 KCNK7Q9Y2U2 307 aa18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 PEX16Q9Y5Y5 336 aa18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 NOTCH2Q04721 2471 aa18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM90A10PA6NDY2 464 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM90A18PA6NE21 464 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM90A16PA6NEW6 464 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM90A20PA6NIJ5 464 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM90A8PA6NJQ4 464 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM90A7PA6NKC0 464 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM90A22PA8MWA6 464 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM90A12PA8MX19 464 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM90A5PA8MXJ8 464 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM90A23PA8MXZ1 464 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 SH2D1BO14796 132 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 DEGS1O15121 323 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 CHRM2P08172 466 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM90A15PP0C7V4 464 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM90A13PP0C7W8 464 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM90A14PP0C7W9 464 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM90A24PP0C7X0 464 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 SELLP14151 372 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 ZNF44P15621 663 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 GPR6P46095 362 aaPredicted RBP18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 GABRA2P47869 451 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 COL10A1Q03692 680 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 MPV17LQ2QL34 196 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FIP1L1Q6UN15 594 aaKnown RBP18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 C6orf201Q7Z4U5 140 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 IZUMO1Q8IYV9 350 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 ZNRF1Q8ND25 227 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 OR4M1Q8NGD0 313 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 OR56B1Q8NGI3 324 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 OR10R2Q8NGX6 335 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 POM121Q96HA1 1249 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 WDFY2Q96P53 400 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 ZMAT3Q9HA38 289 aaKnown RBP18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 SEBOXQ9HB31 216 aaPredicted RBP18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 RCC2Q9P258 522 aaKnown RBP18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 MED13LQ71F56 2210 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 PRRC2AP48634 2157 aaKnown RBP18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM25AB3EWG3 89 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM25CB3EWG5 89 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM25GB3EWG6 89 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 SIRPB1O00241 398 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 SLC33A1O00400 549 aaPredicted RBP18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 CHATP28329 748 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 CNIH2Q6PI25 160 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 C17orf107Q6ZR85 190 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 LINC00596Q86U02 117 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 KRTAP1-3Q8IUG1 177 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 BPIFB2Q8N4F0 458 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 SDSLQ96GA7 329 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 TIMD4Q96H15 378 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 ARHGAP5-AS1Q96IT6 56 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 GAFA1Q96PS6 74 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 SHARPINQ9H0F6 387 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 CTSZQ9UBR2 303 aa18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 ELF5Q9UKW6 265 aaPredicted RBP18.18■□□□□ 0.5
PDLIM3-203ENST00000284771 IGHV4-30-2A0A087WSY4 118 aa18.17■□□□□ 0.5
PDLIM3-203ENST00000284771 TMEM82A0PJX8 343 aa18.17■□□□□ 0.5
PDLIM3-203ENST00000284771 ISPDA4D126 451 aa18.17■□□□□ 0.5
PDLIM3-203ENST00000284771 VWC2LB2RUY7 222 aa18.17■□□□□ 0.5
PDLIM3-203ENST00000284771 ZNF737O75373 536 aa18.17■□□□□ 0.5
PDLIM3-203ENST00000284771 ATAD3CQ5T2N8 411 aa18.17■□□□□ 0.5
PDLIM3-203ENST00000284771 OLFML2AQ68BL7 652 aa18.17■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM216BQ8N7L0 139 aa18.17■□□□□ 0.5
PDLIM3-203ENST00000284771 SUMF2Q8NBJ7 301 aa18.17■□□□□ 0.5
PDLIM3-203ENST00000284771 DIRAS2Q96HU8 199 aa18.17■□□□□ 0.5
PDLIM3-203ENST00000284771 EXTL2Q9UBQ6 330 aa18.17■□□□□ 0.5
PDLIM3-203ENST00000284771 CEACAM18A8MTB9 384 aa18.16■□□□□ 0.5
PDLIM3-203ENST00000284771 HSPB6O14558 160 aa18.16■□□□□ 0.5
PDLIM3-203ENST00000284771 TMPRSS2O15393 492 aa18.16■□□□□ 0.5
PDLIM3-203ENST00000284771 XRCC3O43542 346 aa18.16■□□□□ 0.5
PDLIM3-203ENST00000284771 PTHLHP12272 177 aa18.16■□□□□ 0.5
PDLIM3-203ENST00000284771 FUT3P21217 361 aa18.16■□□□□ 0.5
PDLIM3-203ENST00000284771 S100A5P33763 92 aa18.16■□□□□ 0.5
PDLIM3-203ENST00000284771 NKAPLQ5M9Q1 402 aa18.16■□□□□ 0.5
PDLIM3-203ENST00000284771 CLEC2AQ6UVW9 174 aa18.16■□□□□ 0.5
PDLIM3-203ENST00000284771 Q6ZTK2 550 aa18.16■□□□□ 0.5
PDLIM3-203ENST00000284771 CCDC190Q86UF4 302 aa18.16■□□□□ 0.5
PDLIM3-203ENST00000284771 FGFRL1Q8N441 504 aa18.16■□□□□ 0.5
PDLIM3-203ENST00000284771 NARFLQ9H6Q4 476 aa18.16■□□□□ 0.5
PDLIM3-203ENST00000284771 PDCD6O75340 191 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 HLA-DQB1P01920 261 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 GNB3P16520 340 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM189A2Q15884 450 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 CLEC12BQ2HXU8 276 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 TMEM155Q4W5P6 130 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 RAB12Q6IQ22 244 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 DCDC5Q6ZRR9 648 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 RAB3CQ96E17 227 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 SOSTQ9BQB4 213 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 SULT4A1Q9BR01 284 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 FAAP24Q9BTP7 215 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 PECRQ9BY49 303 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 CHST6Q9GZX3 395 aa18.15■□□□□ 0.5
PDLIM3-203ENST00000284771 ZNF665Q9H7R5 613 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms