RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 NPIPA2E9PIF3 369 aa20.59■□□□□ 0.89
RETREG2-201ENST00000273048 NPIPA3F8WFD2 350 aa20.59■□□□□ 0.89
RETREG2-201ENST00000273048 SLC33A1O00400 549 aaPredicted RBP20.59■□□□□ 0.89
RETREG2-201ENST00000273048 HOXA5P20719 270 aa20.59■□□□□ 0.89
RETREG2-201ENST00000273048 ZNF574Q6ZN55 896 aaPredicted RBP20.59■□□□□ 0.89
RETREG2-201ENST00000273048 ZNF700Q9H0M5 742 aa20.59■□□□□ 0.89
RETREG2-201ENST00000273048 SDK2Q58EX2 2172 aa20.58■□□□□ 0.89
RETREG2-201ENST00000273048 CCDC163A0A0D9SF12 145 aa20.58■□□□□ 0.89
RETREG2-201ENST00000273048 NDUFS6O75380 124 aaKnown RBP20.58■□□□□ 0.89
RETREG2-201ENST00000273048 CXCL1P09341 107 aa20.58■□□□□ 0.89
RETREG2-201ENST00000273048 TAGLN2P37802 199 aaKnown RBP20.58■□□□□ 0.89
RETREG2-201ENST00000273048 HIKESHIQ53FT3 197 aa20.58■□□□□ 0.89
RETREG2-201ENST00000273048 PYY3Q5JQD4 70 aa20.58■□□□□ 0.89
RETREG2-201ENST00000273048 RABEPKQ7Z6M1 372 aa20.58■□□□□ 0.89
RETREG2-201ENST00000273048 KMT5CQ86Y97 462 aa20.58■□□□□ 0.89
RETREG2-201ENST00000273048 TMEM123Q8N131 208 aa20.58■□□□□ 0.89
RETREG2-201ENST00000273048 BORCS8Q96FH0 119 aa20.58■□□□□ 0.89
RETREG2-201ENST00000273048 GPHA2Q96T91 129 aa20.58■□□□□ 0.89
RETREG2-201ENST00000273048 TMED3Q9Y3Q3 217 aa20.58■□□□□ 0.89
RETREG2-201ENST00000273048 CHCHD2Q9Y6H1 151 aaPredicted RBP20.58■□□□□ 0.89
RETREG2-201ENST00000273048 SCRG1O75711 98 aa20.58■□□□□ 0.88
RETREG2-201ENST00000273048 NR2C1P13056 603 aa20.58■□□□□ 0.88
RETREG2-201ENST00000273048 RBP2P50120 134 aa20.58■□□□□ 0.88
RETREG2-201ENST00000273048 DEFB126Q9BYW3 111 aa20.58■□□□□ 0.88
RETREG2-201ENST00000273048 ULBP2Q9BZM5 246 aa20.58■□□□□ 0.88
RETREG2-201ENST00000273048 ZNF576Q9H609 170 aa20.58■□□□□ 0.88
RETREG2-201ENST00000273048 ZNF286AQ9HBT8 521 aa20.58■□□□□ 0.88
RETREG2-201ENST00000273048 ST3GAL6Q9Y274 331 aa20.58■□□□□ 0.88
RETREG2-201ENST00000273048 SSSCA1O60232 199 aa20.57■□□□□ 0.88
RETREG2-201ENST00000273048 PATE4P0C8F1 98 aa20.57■□□□□ 0.88
RETREG2-201ENST00000273048 HERV-K104P61576 105 aa20.57■□□□□ 0.88
RETREG2-201ENST00000273048 ZNF774Q6NX45 483 aa20.57■□□□□ 0.88
RETREG2-201ENST00000273048 FOXL2NBQ6ZUU3 175 aa20.57■□□□□ 0.88
RETREG2-201ENST00000273048 OR14L1PQ8NHC6 308 aa20.57■□□□□ 0.88
RETREG2-201ENST00000273048 Q8WTZ3 238 aa20.57■□□□□ 0.88
RETREG2-201ENST00000273048 C11orf1Q9H5F2 150 aa20.57■□□□□ 0.88
RETREG2-201ENST00000273048 G3V3Y1 287 aa20.57■□□□□ 0.88
RETREG2-201ENST00000273048 HSD17B6O14756 317 aa20.57■□□□□ 0.88
RETREG2-201ENST00000273048 CELA2AP08217 269 aa20.57■□□□□ 0.88
RETREG2-201ENST00000273048 ZNF674Q2M3X9 581 aa20.57■□□□□ 0.88
RETREG2-201ENST00000273048 WDR74Q6RFH5 385 aaPredicted RBP20.57■□□□□ 0.88
RETREG2-201ENST00000273048 OSR2Q8N2R0 312 aa20.57■□□□□ 0.88
RETREG2-201ENST00000273048 AKIRIN1Q9H9L7 192 aaPredicted RBP20.57■□□□□ 0.88
RETREG2-201ENST00000273048 DOK5Q9P104 306 aa20.57■□□□□ 0.88
RETREG2-201ENST00000273048 C3orf85A0A1B0GTC6 90 aa20.56■□□□□ 0.88
RETREG2-201ENST00000273048 TERTO14746 1132 aaKnown RBP20.56■□□□□ 0.88
RETREG2-201ENST00000273048 NXPH3O95157 252 aa20.56■□□□□ 0.88
RETREG2-201ENST00000273048 NTNG2Q96CW9 530 aa20.56■□□□□ 0.88
RETREG2-201ENST00000273048 DKK1O94907 266 aa20.56■□□□□ 0.88
RETREG2-201ENST00000273048 LCATP04180 440 aa20.56■□□□□ 0.88
RETREG2-201ENST00000273048 SRP19P09132 144 aaKnown RBP20.56■□□□□ 0.88
RETREG2-201ENST00000273048 UBE2KP61086 200 aa20.56■□□□□ 0.88
RETREG2-201ENST00000273048 RAET1LQ5VY80 246 aa20.56■□□□□ 0.88
RETREG2-201ENST00000273048 GLRX2Q9NS18 164 aa20.56■□□□□ 0.88
RETREG2-201ENST00000273048 SLC7A11Q9UPY5 501 aa20.56■□□□□ 0.88
RETREG2-201ENST00000273048 MPPED1O15442 326 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 CST7O76096 145 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 IGFBP4P22692 258 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 CRYGSP22914 178 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 NKX2-1P43699 371 aaPredicted RBP20.55■□□□□ 0.88
RETREG2-201ENST00000273048 RUNX1Q01196 453 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 ZNF266Q14584 549 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 ELOBQ15370 118 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 CNN3Q15417 329 aaKnown RBP20.55■□□□□ 0.88
RETREG2-201ENST00000273048 CXorf66Q5JRM2 361 aaPredicted RBP20.55■□□□□ 0.88
RETREG2-201ENST00000273048 TMEM217Q8N7C4 229 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 CYB561D1Q8N8Q1 229 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 CCDC71LQ8N9Z2 235 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 OR5C1Q8NGR4 320 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 BCO1Q9HAY6 547 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 DMRT1Q9Y5R6 373 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 PPYP01298 95 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 EPHA1P21709 976 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 CDX1P47902 265 aaPredicted RBP20.55■□□□□ 0.88
RETREG2-201ENST00000273048 ERVFRD-1P60508 538 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 DLK1P80370 383 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 P4HTMQ9NXG6 502 aa20.55■□□□□ 0.88
RETREG2-201ENST00000273048 PROB1E7EW31 1015 aa20.54■□□□□ 0.88
RETREG2-201ENST00000273048 NRASP01111 189 aa20.54■□□□□ 0.88
RETREG2-201ENST00000273048 ZIC4Q8N9L1 334 aa20.54■□□□□ 0.88
RETREG2-201ENST00000273048 FOXD3Q9UJU5 478 aaPredicted RBP20.54■□□□□ 0.88
RETREG2-201ENST00000273048 TGIF2-C20orf24A0A0A6YYL0 155 aa20.54■□□□□ 0.88
RETREG2-201ENST00000273048 TRDCB7Z8K6 153 aa20.54■□□□□ 0.88
RETREG2-201ENST00000273048 PITX3O75364 302 aa20.54■□□□□ 0.88
RETREG2-201ENST00000273048 RGS19P49795 217 aa20.54■□□□□ 0.88
RETREG2-201ENST00000273048 UCP3P55916 312 aa20.54■□□□□ 0.88
RETREG2-201ENST00000273048 SPNS3Q6ZMD2 512 aa20.54■□□□□ 0.88
RETREG2-201ENST00000273048 ZNF429Q86V71 674 aa20.54■□□□□ 0.88
RETREG2-201ENST00000273048 MAML2Q8IZL2 1156 aaPredicted RBP20.54■□□□□ 0.88
RETREG2-201ENST00000273048 TMEM252Q8N6L7 170 aa20.54■□□□□ 0.88
RETREG2-201ENST00000273048 ZNF442Q9H7R0 627 aa20.54■□□□□ 0.88
RETREG2-201ENST00000273048 ODF3L1Q8IXM7 274 aa20.53■□□□□ 0.88
RETREG2-201ENST00000273048 PFDN5Q99471 154 aa20.53■□□□□ 0.88
RETREG2-201ENST00000273048 SMDT1Q9H4I9 107 aa20.53■□□□□ 0.88
RETREG2-201ENST00000273048 SYNGR3O43761 229 aa20.53■□□□□ 0.88
RETREG2-201ENST00000273048 GNRHRP30968 328 aa20.53■□□□□ 0.88
RETREG2-201ENST00000273048 ICAM4Q14773 271 aa20.53■□□□□ 0.88
RETREG2-201ENST00000273048 FAM27BQ5VT28 67 aa20.53■□□□□ 0.88
RETREG2-201ENST00000273048 ASCL4Q6XD76 172 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms