RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 FAM74A7A6NL05 159 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 ATG12O94817 140 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 CD63P08962 238 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 PTGER4P35408 488 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 FAM74A3Q4VXF1 159 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 JMJD6Q6NYC1 403 aaPredicted RBP10.9□□□□□ -0.66
UBXN4-201ENST00000272638 CCDC54Q8NEL0 328 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 OR10J5Q8NHC4 309 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 SDSLQ96GA7 329 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 SPIN2AQ99865 258 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 SPIN2BQ9BPZ2 258 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 CNTNAP3Q9BZ76 1288 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 SPACA1Q9HBV2 294 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 RAB18Q9NP72 206 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 SLC2A9Q9NRM0 540 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 MSTNO14793 375 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 GUCA2BQ16661 112 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 PRSS54Q6PEW0 395 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 DEFB108BQ8NET1 73 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 C14orf79Q96F83 325 aa10.9□□□□□ -0.66
UBXN4-201ENST00000272638 SNAPINO95295 136 aa10.9□□□□□ -0.67
UBXN4-201ENST00000272638 CD74P04233 296 aa10.9□□□□□ -0.67
UBXN4-201ENST00000272638 ZNF674Q2M3X9 581 aa10.9□□□□□ -0.67
UBXN4-201ENST00000272638 DEFB109BQ30KR1 87 aa10.9□□□□□ -0.67
UBXN4-201ENST00000272638 ADAM5Q6NVV9 412 aa10.9□□□□□ -0.67
UBXN4-201ENST00000272638 WDR5BQ86VZ2 330 aa10.9□□□□□ -0.67
UBXN4-201ENST00000272638 TMEM251Q8N6I4 163 aa10.9□□□□□ -0.67
UBXN4-201ENST00000272638 NPTNQ9Y639 398 aa10.9□□□□□ -0.67
UBXN4-201ENST00000272638 SPTBN5Q9NRC6 3674 aaKnown RBP10.9□□□□□ -0.67
UBXN4-201ENST00000272638 TRGV5A0A0B4J1U4 118 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 GCH1P30793 250 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 ELLP55199 621 aaPredicted RBP10.89□□□□□ -0.67
UBXN4-201ENST00000272638 FIP1L1Q6UN15 594 aaKnown RBP10.89□□□□□ -0.67
UBXN4-201ENST00000272638 SSX9Q7RTT3 188 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 CALHM1Q8IU99 346 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 OR10Z1Q8NGY1 313 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 RASL12Q9NYN1 266 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 PRSS50Q9UI38 385 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 MFNGO00587 321 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 HMGB3O15347 200 aaKnown RBP10.89□□□□□ -0.67
UBXN4-201ENST00000272638 ADAM20O43506 726 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 ZNF529Q6P280 563 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 MYPOPQ86VE0 399 aaPredicted RBP10.89□□□□□ -0.67
UBXN4-201ENST00000272638 STX12Q86Y82 276 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 HEATR1Q9H583 2144 aaKnown RBP10.89□□□□□ -0.67
UBXN4-201ENST00000272638 DEFB108AA8MXU0 73 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 CDRT15L2A8MXV6 281 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 SYNGR1O43759 233 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 AGFG2O95081 481 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 NHLH2Q02577 135 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 MIDNQ504T8 468 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 FAM166AQ6J272 317 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 TMEM123Q8N131 208 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 OR1J1Q8NGS3 322 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 PTX4Q96A99 478 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 PIK3IP1Q96FE7 263 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 WNT5BQ9H1J7 359 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 CCL28Q9NRJ3 127 aa10.89□□□□□ -0.67
UBXN4-201ENST00000272638 KLF13Q9Y2Y9 288 aaPredicted RBP10.89□□□□□ -0.67
UBXN4-201ENST00000272638 ZFP92A6NM28 416 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 GPR37O15354 613 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 CLDN1O95832 211 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 SCTP09683 121 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 RAC2P15153 192 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 EDDM3BP56851 147 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 ZNF239Q16600 458 aaKnown RBP10.88□□□□□ -0.67
UBXN4-201ENST00000272638 SPANXN5Q5MJ07 72 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 LCN15Q6UWW0 184 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 APOBEC3DQ96AK3 386 aaPredicted RBP10.88□□□□□ -0.67
UBXN4-201ENST00000272638 TTTY12Q9BZ98 90 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 NAA60Q9H7X0 242 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 TMEM9BQ9NQ34 198 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 CDIPTO14735 213 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 FCGR3AP08637 254 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 NFYBP25208 207 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 FHITP49789 147 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 SPINK9Q5DT21 86 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 TPRX1Q8N7U7 411 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 KIRREL1Q96J84 757 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 GLS2Q9UI32 602 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 RNF222A6NCQ9 220 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 HPP00738 406 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 CST2P09228 141 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 MPGP29372 298 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 SOX8P57073 446 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 OR2B8PP59922 312 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 ZNF766Q5HY98 468 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 RPUSD3Q6P087 351 aaKnown RBP10.88□□□□□ -0.67
UBXN4-201ENST00000272638 GAPTQ8N292 157 aa10.88□□□□□ -0.67
UBXN4-201ENST00000272638 IGHV3-43A0A0B4J1X8 118 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 SOX15O60248 233 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 JTBO76095 146 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 IGHV3-43DP0DP04 118 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 CSRP2Q16527 193 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 TBC1D28Q2M2D7 210 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 FADS6Q8N9I5 356 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 SUMF2Q8NBJ7 301 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 ISOC2Q96AB3 205 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 A0A0U1RQV5 110 aa10.87□□□□□ -0.67
UBXN4-201ENST00000272638 NKX2-6A6NCS4 301 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms