RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 DRAM2Q6UX65 266 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 SSX7Q7RTT5 188 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 GCNT2Q8N0V5 402 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 SLC22A18ASQ8N1D0 253 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 APH1AQ96BI3 265 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 NTNG2Q96CW9 530 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 PLPPR2Q96GM1 343 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 GPR61Q9BZJ8 451 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 TMEM74BQ9NUR3 256 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 ANXA10Q9UJ72 324 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 NCOR1O75376 2440 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 AQP7P3A6NL99 342 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 TRGC2P03986 189 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 ASAH2BP0C7U1 165 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 KLK2P20151 261 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 RPS4Y1P22090 263 aaKnown RBP10.19□□□□□ -0.78
VPS33A-201ENST00000267199 PPP1CBP62140 327 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 NAAAQ02083 359 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 IL13RA2Q14627 380 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 FHL5Q5TD97 284 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 ETV3LQ6ZN32 361 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 C9orf40Q8IXQ3 194 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 OIT3Q8WWZ8 545 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 ASB10Q8WXI3 467 aa10.19□□□□□ -0.78
VPS33A-201ENST00000267199 ZNF331Q9NQX6 463 aaPredicted RBP10.19□□□□□ -0.78
VPS33A-201ENST00000267199 RCC2Q9P258 522 aaKnown RBP10.19□□□□□ -0.78
VPS33A-201ENST00000267199 A0A1W2PQD3 144 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 C5orf49A4QMS7 147 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 VSTM5A8MXK1 200 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 GATCO43716 136 aaKnown RBP10.18□□□□□ -0.78
VPS33A-201ENST00000267199 SLC25A6P12236 298 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 MMP9P14780 707 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 CD46P15529 392 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 EDDM3BP56851 147 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 ZNF154Q13106 437 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 CADM4Q8NFZ8 388 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 DYRK2Q92630 601 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 CTHRC1Q96CG8 243 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 ACTL6AO96019 429 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 CTSDP07339 412 aaPredicted RBP10.18□□□□□ -0.78
VPS33A-201ENST00000267199 FHITP49789 147 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 RUNX1Q01196 453 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 ZNF816Q0VGE8 651 aaPredicted RBP10.18□□□□□ -0.78
VPS33A-201ENST00000267199 CEBPEQ15744 281 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 ETFRF1Q6IPR1 90 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 ADPRHL1Q8NDY3 354 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 IP6K3Q96PC2 410 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 MENTQ9BUN1 341 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 TPPP3Q9BW30 176 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 CTDSP1Q9GZU7 261 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 HEXA-AS1Q9H8Q6 139 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 IL17BQ9UHF5 180 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 ZSWIM8A7E2V4 1837 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 C20orf202A1L168 122 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 CBR3O75828 277 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 DHRS3O75911 302 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 SULT1A2P50226 295 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 ZNF92Q03936 586 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 VASH2Q86V25 355 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 HIST1H2BAQ96A08 127 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 OR10C1Q96KK4 312 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 SOSTQ9BQB4 213 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 AURKAIP1Q9NWT8 199 aaPredicted RBP10.18□□□□□ -0.78
VPS33A-201ENST00000267199 CLCF1Q9UBD9 225 aa10.18□□□□□ -0.78
VPS33A-201ENST00000267199 ZNF646O15015 1829 aaPredicted RBP10.18□□□□□ -0.78
VPS33A-201ENST00000267199 SNRNP200O75643 2136 aaKnown RBP10.17□□□□□ -0.78
VPS33A-201ENST00000267199 CD1AP06126 327 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 ACAA1P09110 424 aaPredicted RBP10.17□□□□□ -0.78
VPS33A-201ENST00000267199 CLDN15P56746 228 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 FAM78BQ5VT40 261 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 CYB561D1Q8N8Q1 229 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 SLC25A28Q96A46 364 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 ERRFI1Q9UJM3 462 aaPredicted RBP10.17□□□□□ -0.78
VPS33A-201ENST00000267199 TRBV5-5A0A0J9YX44 114 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 M0R143 59 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 ATP6V0CP27449 155 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 FABP6P51161 128 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 RHBDD2Q6NTF9 364 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 SLC26A10Q8NG04 563 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 CACNG5Q9UF02 275 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 LHX6Q9UPM6 363 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 LRP5LA4QPB2 252 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 ZNF737O75373 536 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 GALNSP34059 522 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 FZD5Q13467 585 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 BSXQ3C1V8 233 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 SLC2A9Q9NRM0 540 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 MTCL1Q9Y4B5 1905 aaKnown RBP10.17□□□□□ -0.78
VPS33A-201ENST00000267199 A0A1B0GV90 55 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 LIPT2A6NK58 231 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 CHST1O43916 411 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 GPM6AP51674 278 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 EWSR1Q01844 656 aaKnown RBP eCLIP10.17□□□□□ -0.78
VPS33A-201ENST00000267199 HABP2Q14520 560 aaPredicted RBP10.17□□□□□ -0.78
VPS33A-201ENST00000267199 VHLLQ6RSH7 139 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 MSI2Q96DH6 328 aaKnown RBP10.17□□□□□ -0.78
VPS33A-201ENST00000267199 SLC26A1Q9H2B4 701 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 GSN-AS1Q9NRJ2 163 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 FUT9Q9Y231 359 aa10.17□□□□□ -0.78
VPS33A-201ENST00000267199 ZNF318Q5VUA4 2279 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms