RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 AAED1Q7RTV5 226 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 OSR2Q8N2R0 312 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 GPR137CQ8N3F9 429 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 C17orf78Q8N4C9 275 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 TM2D1Q9BX74 207 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 NIT2Q9NQR4 276 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 PARP11Q9NR21 331 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 SEMA5BQ9P283 1151 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 HS3ST3B1Q9Y662 390 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 PRR14LQ5THK1 2151 aa7.9□□□□□ -1.14
MSH4-201ENST00000263187 ARPC4-TTLL3A0A0A6YYG9 625 aa7.9□□□□□ -1.15
MSH4-201ENST00000263187 ETV2O00321 342 aaPredicted RBP7.9□□□□□ -1.15
MSH4-201ENST00000263187 TAAR5O14804 337 aa7.9□□□□□ -1.15
MSH4-201ENST00000263187 KLK3P07288 261 aaPredicted RBP7.9□□□□□ -1.15
MSH4-201ENST00000263187 CHATP28329 748 aa7.9□□□□□ -1.15
MSH4-201ENST00000263187 SNCAP37840 140 aa7.9□□□□□ -1.15
MSH4-201ENST00000263187 KCNMB1Q16558 191 aa7.9□□□□□ -1.15
MSH4-201ENST00000263187 IFI44Q8TCB0 444 aa7.9□□□□□ -1.15
MSH4-201ENST00000263187 RHBDD1Q8TEB9 315 aa7.9□□□□□ -1.15
MSH4-201ENST00000263187 NTNG2Q96CW9 530 aa7.9□□□□□ -1.15
MSH4-201ENST00000263187 UBE2J1Q9Y385 318 aaPredicted RBP7.9□□□□□ -1.15
MSH4-201ENST00000263187 ARHGAP21Q5T5U3 1957 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 NSG1A0A0A6YYJ2 146 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 LINC00587B1AMM8 73 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 FAM157AC9JC47 383 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 E5RGE8 158 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 SCTP09683 121 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 PTAFRP25105 342 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 EPHA8P29322 1005 aaPredicted RBP7.89□□□□□ -1.15
MSH4-201ENST00000263187 FOXG1P55316 489 aaPredicted RBP7.89□□□□□ -1.15
MSH4-201ENST00000263187 OPN5Q6U736 354 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 SKA3Q8IX90 412 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 ZNF611Q8N823 705 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 DNASE2BQ8WZ79 361 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 TMEM54Q969K7 222 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 BCL2L14Q9BZR8 327 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 SLC7A10Q9NS82 523 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 SLC7A11Q9UPY5 501 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 MRPS17Q9Y2R5 130 aaKnown RBP7.89□□□□□ -1.15
MSH4-201ENST00000263187 NSG2Q9Y328 171 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 CEP192Q8TEP8 1941 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 DOCK10Q96BY6 2186 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 IGHV1-45A0A0A0MS14 117 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 BORCS7-ASMTA0A0B4J1R7 106 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 ST8SIA3O43173 380 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 COX6A1P12074 109 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 GPM6AP51674 278 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 ZNF133P52736 654 aaPredicted RBP7.89□□□□□ -1.15
MSH4-201ENST00000263187 FAM189A2Q15884 450 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 PDZD11Q5EBL8 140 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 ZNF343Q6P1L6 599 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 MRPL14Q6P1L8 145 aaKnown RBP7.89□□□□□ -1.15
MSH4-201ENST00000263187 ZNF565Q8N9K5 539 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 OR2G3Q8NGZ4 309 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 KCNJ16Q9NPI9 418 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 GHRLQ9UBU3 117 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 PISDQ9UG56 409 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 SMG1Q96Q15 3661 aaKnown RBP7.89□□□□□ -1.15
MSH4-201ENST00000263187 SVILO95425 2214 aa7.89□□□□□ -1.15
MSH4-201ENST00000263187 IGLV3-32A0A0A0MS00 114 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 HS3ST1O14792 307 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 SYNGR3O43761 229 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 DKK1O94907 266 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 HLA-HP01893 362 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 GNRHRP30968 328 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 DSCR4P56555 118 aaPredicted RBP7.88□□□□□ -1.15
MSH4-201ENST00000263187 MALLQ13021 153 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 LYSMD4Q5XG99 296 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 LIAT1Q6ZQX7 453 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 ADPRHL1Q8NDY3 354 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 LUZP4Q9P127 313 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 TUBD1Q9UJT1 453 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 FOXD3Q9UJU5 478 aaPredicted RBP7.88□□□□□ -1.15
MSH4-201ENST00000263187 TRAV20A0A0B4J274 112 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 ADAM20O43506 726 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 EIF1BO60739 113 aaKnown RBP7.88□□□□□ -1.15
MSH4-201ENST00000263187 KLF7O75840 302 aaPredicted RBP7.88□□□□□ -1.15
MSH4-201ENST00000263187 IGLV3-1P01715 115 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 BCL3P20749 454 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 GLP1RP43220 463 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 HAAOP46952 286 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 FAM3AP98173 230 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 GNMTQ14749 295 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 C10orf128Q5T292 105 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 FAM27BQ5VT28 67 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 SPINK14Q6IE38 97 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 ZNF695Q8IW36 515 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 CARFQ8N187 725 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 CPEB3Q8NE35 698 aaKnown RBP7.88□□□□□ -1.15
MSH4-201ENST00000263187 OR10D3Q8NH80 312 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 IL1F10Q8WWZ1 152 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 MSI2Q96DH6 328 aaKnown RBP7.88□□□□□ -1.15
MSH4-201ENST00000263187 ZNF286AQ9HBT8 521 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 KLF2Q9Y5W3 355 aaPredicted RBP7.88□□□□□ -1.15
MSH4-201ENST00000263187 IGSF23A1L1A6 192 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 DANCRP0C864 163 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 TCN2P20062 427 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 SULT1A1P50225 295 aa7.88□□□□□ -1.15
MSH4-201ENST00000263187 EWSR1Q01844 656 aaKnown RBP eCLIP7.88□□□□□ -1.15
MSH4-201ENST00000263187 SURF2Q15527 256 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 333.3 ms