RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 ZNF750Q32MQ0 723 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM92Q6UXU6 159 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 IKZF5Q9H5V7 419 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 ARID1AO14497 2285 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM218A2RU14 115 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 AQP7O14520 342 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 CD160O95971 181 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 BAGE3Q86Y29 109 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 BAGE2Q86Y30 109 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 OR5M8Q8NGP6 311 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 ZDHHC16Q969W1 377 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 ASB1Q9Y576 335 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 MYLKQ15746 1914 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 MS4A18H0YCH9 400 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 H3BSH0 61 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 NGFP01138 241 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 OR10J4P0C629 311 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 ASAH2BP0C7U1 165 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 FGF7P21781 194 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 LPAL2Q16609 132 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 MS4A18Q3C1V0 323 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 C10orf128Q5T292 105 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 XAF1Q6GPH4 301 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 ADGRG7Q96K78 797 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 SEC11CQ9BY50 192 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 UFSP2Q9NUQ7 469 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 HIF1ANQ9NWT6 349 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 TRBV23-1A0A0A0MS06 115 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 A0A1W2PQF6 199 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 A0A1W2PS18 150 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 HAND1O96004 215 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 PGFP49763 221 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 CSRP3P50461 194 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 FABP6P51161 128 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 RPS20P60866 119 aaKnown RBP3.81□□□□□ -1.8
VPS13C-202ENST00000261517 EXOSC2Q13868 293 aaKnown RBP3.81□□□□□ -1.8
VPS13C-202ENST00000261517 CEACAM21Q3KPI0 293 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 VHLLQ6RSH7 139 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 OR1L8Q8NGR8 309 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 ABHD3Q8WU67 409 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 GGACTQ9BVM4 153 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 DEFB127Q9H1M4 99 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 SLC2A8Q9NY64 477 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 CDC42EP3Q9UKI2 254 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 MUC6Q6W4X9 2439 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 FANCMQ8IYD8 2048 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 OR2M5A3KFT3 312 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 M0QYG6 137 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 HS3ST1O14792 307 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 HLA-GP17693 338 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 CSRP1P21291 193 aaKnown RBP3.81□□□□□ -1.8
VPS13C-202ENST00000261517 HLA-DRB3P79483 266 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 DGCR2P98153 550 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 FZD5Q13467 585 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 COTL1Q14019 142 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 GAB4Q2WGN9 574 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 SLC25A53Q5H9E4 307 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 BEX5Q5H9J7 111 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 PLA2G2FQ9BZM2 168 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 KCNK15Q9H427 330 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 OR2W1Q9Y3N9 320 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 COL4A5P29400 1685 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 IGLV3-32A0A0A0MS00 114 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 TRGV8A0A0C4DH27 118 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 C3orf85A0A1B0GTC6 90 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 PTP4A3O75365 173 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 IGHV4-34P06331 123 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 UCP3P55916 312 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 MADCAM1Q13477 382 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 RBM45Q8IUH3 476 aaKnown RBP3.81□□□□□ -1.8
VPS13C-202ENST00000261517 OR52L2PQ8NGH6 319 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 GPR35Q9HC97 309 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF355PQ9NSJ1 428 aa3.81□□□□□ -1.8
VPS13C-202ENST00000261517 IGHV1-45A0A0A0MS14 117 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM8BA6NDV4 472 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 OR4C45A6NMZ5 311 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 MMP7P09237 267 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 EDDM3AQ14507 147 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 SRSF7Q16629 238 aaKnown RBP eCLIP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 CCL4L1Q8NHW4 92 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 PPP1R1CQ8WVI7 109 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 ST8SIA2Q92186 375 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 NRSN2Q9GZP1 204 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 IL36GQ9NZH8 169 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 PITPNC1Q9UKF7 332 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 C9orf170A2RU37 121 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 ZFP92A6NM28 416 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 RAB29O14966 203 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF32P17041 273 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 F2RP25116 425 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 CTSSP25774 331 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 PTGDSP41222 190 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 RPS10P46783 165 aaKnown RBP3.8□□□□□ -1.8
VPS13C-202ENST00000261517 PSG6Q00889 435 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF273Q14593 569 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 BHLHE23Q8NDY6 225 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 CTHRC1Q96CG8 243 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 SMIM14Q96QK8 99 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 OR1A1Q9P1Q5 309 aa3.8□□□□□ -1.8
VPS13C-202ENST00000261517 PLXNA4Q9HCM2 1894 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms