RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 CMTM4Q8IZR5 234 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 ZBTB8BQ8NAP8 495 aaPredicted RBP13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 CCL13Q99616 98 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 PIMREGQ9BSJ6 248 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 ATG5Q9H1Y0 275 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 ABCG5Q9H222 651 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 MMP27Q9H306 513 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 NARFLQ9H6Q4 476 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 A3GALT2U3KPV4 340 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 NOTCH2Q04721 2471 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 CCDC168Q8NDH2 2452 aa13.19□□□□□ -0.3
CCDC90B-201ENST00000260054 CEACAM18A8MTB9 384 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 FOXI3A8MTJ6 420 aaPredicted RBP13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 RAB27BO00194 218 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 SH2D1BO14796 132 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 SOCS1O15524 211 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 ZNF44P15621 663 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 ELK1P19419 428 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 COL10A1Q03692 680 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 MPV17LQ2QL34 196 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 TMEM155Q4W5P6 130 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 ATPAF1Q5TC12 328 aaPredicted RBP13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 ZNF788Q6ZQV5 615 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 DCDC5Q6ZRR9 648 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 LINC00596Q86U02 117 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 RTN4RL2Q86UN3 420 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 MUC20Q8N307 709 aaPredicted RBP13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM216BQ8N7L0 139 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 COX4I2Q96KJ9 171 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 GAFA1Q96PS6 74 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 SEBOXQ9HB31 216 aaPredicted RBP13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 MAB21L2Q9Y586 359 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 METTL21EPA6NDL7 271 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM90A10PA6NDY2 464 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM90A18PA6NE21 464 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM90A16PA6NEW6 464 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM90A20PA6NIJ5 464 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM90A8PA6NJQ4 464 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM90A7PA6NKC0 464 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM90A22PA8MWA6 464 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM90A12PA8MX19 464 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM90A5PA8MXJ8 464 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM90A23PA8MXZ1 464 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 SIRPB1O00241 398 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 DEGS1O15121 323 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 APOA1P02647 267 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM90A15PP0C7V4 464 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM90A13PP0C7W8 464 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM90A14PP0C7W9 464 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM90A24PP0C7X0 464 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 SELLP14151 372 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 NR4A2P43354 598 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 PITPNBP48739 271 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 KCNJ8Q15842 424 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 ZNRF1Q8ND25 227 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 SDSLQ96GA7 329 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 POM121Q96HA1 1249 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 CMTM3Q96MX0 182 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 IFT22Q9H7X7 185 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 CTSZQ9UBR2 303 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 GLS2Q9UI32 602 aa13.18□□□□□ -0.3
CCDC90B-201ENST00000260054 MAP1AP78559 2803 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 TRAV24A0A0B4J272 114 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 SLC33A1O00400 549 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 SIGLEC5O15389 551 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 TMPRSS2O15393 492 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 NDUFA2O43678 99 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 PSPNO60542 156 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 CHRM2P08172 466 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 INHBBP09529 407 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 LMO1P25800 156 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 BLVRBP30043 206 aaPredicted RBP13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 TMEM50BP56557 158 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 ATAD3CQ5T2N8 411 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 BRICD5Q6PL45 260 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 PRSS57Q6UWY2 283 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 DTX3Q8N9I9 347 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 OR56B1Q8NGI3 324 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 RAB40AQ8WXH6 277 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 FOXC2Q99958 501 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 DNTTIP1Q9H147 329 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 ZNF665Q9H7R5 613 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 RCC2Q9P258 522 aaKnown RBP13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 KAAG1Q9UBP8 84 aa13.17□□□□□ -0.3
CCDC90B-201ENST00000260054 TMEM82A0PJX8 343 aa13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 HSPB6O14558 160 aa13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 ADAM20O43506 726 aa13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 ZNF737O75373 536 aa13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 FCN3O75636 299 aa13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 CLPXO76031 633 aa13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 CDK2P24941 298 aa13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 CHATP28329 748 aa13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 FAM189A2Q15884 450 aa13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 PLAC9Q5JTB6 97 aa13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 NKAPLQ5M9Q1 402 aa13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 C17orf107Q6ZR85 190 aa13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 ZNF561Q8N587 486 aa13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 SPICQ8N5J4 248 aa13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 ASCC1Q8N9N2 400 aaKnown RBP13.16□□□□□ -0.3
CCDC90B-201ENST00000260054 SUMF2Q8NBJ7 301 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms