RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ZDHHC11Q9H8X9 412 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 TMEM38BQ9NVV0 291 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 B3GALNT1O75752 331 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 ALX3O95076 343 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 FGF9P31371 208 aaPredicted RBP7.68□□□□□ -1.18
PTCD3-201ENST00000254630 XAF1Q6GPH4 301 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 OR5R1Q8NH85 324 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 PIK3IP1Q96FE7 263 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 GPR137Q96N19 417 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 PCOLCE2Q9UKZ9 415 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 ZNFX1Q9P2E3 1918 aaKnown RBP7.68□□□□□ -1.18
PTCD3-201ENST00000254630 ANKRD20A5PA0PJZ0 165 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 MOSPD3O75425 235 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 GP1BAP07359 652 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 BRS3P32247 399 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 AMTP48728 403 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 DYNLT3P51808 116 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 OR4D11Q8NGI4 311 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 THYN1Q9P016 225 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 A0A1W2PQF6 199 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 RNASEK-C17orf49H0YIS7 233 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 LANCL1O43813 399 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 ZNF737O75373 536 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 UCNP55089 124 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 PRSS12P56730 875 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 PSG6Q00889 435 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 CLEC12BQ2HXU8 276 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 SLC22A18ASQ8N1D0 253 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 HSD17B10Q99714 261 aaKnown RBP7.68□□□□□ -1.18
PTCD3-201ENST00000254630 TGIF2Q9GZN2 237 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 FRRS1LQ9P0K9 344 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 MTFP1Q9UDX5 166 aa7.68□□□□□ -1.18
PTCD3-201ENST00000254630 YTHDF2Q9Y5A9 579 aaKnown RBP7.68□□□□□ -1.18
PTCD3-201ENST00000254630 TCRBV16S1A1N1A0A5B0 115 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 CST4P01036 141 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 OPN1MWP04001 364 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 OPN1MW2P0DN77 364 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 OPN1MW3P0DN78 364 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 DCAF10Q5QP82 559 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 UQCC3Q6UW78 93 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 C17orf47Q8NEP4 570 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 RNF2Q99496 336 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 PLAC1Q9HBJ0 212 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 LPAR3Q9UBY5 353 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 NTN1O95631 604 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 CPN1P15169 458 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 ACP1P24666 158 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 HMGA2P52926 109 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 TMEM97Q5BJF2 176 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 INO80CQ6PI98 192 aaPredicted RBP7.67□□□□□ -1.18
PTCD3-201ENST00000254630 MDP1Q86V88 176 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 SH2D2AQ9NP31 389 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 SCN1AP35498 2009 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 COL19A1Q14993 1142 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 STPG1Q5TH74 334 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 MUC20Q8N307 709 aaPredicted RBP7.67□□□□□ -1.18
PTCD3-201ENST00000254630 OR5C1Q8NGR4 320 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 OR1A1Q9P1Q5 309 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 MCM3APO60318 1980 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 PLXNA1Q9UIW2 1896 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 ATP6V1FQ16864 119 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 ZNF260Q3ZCT1 412 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 SLC23A3Q6PIS1 610 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 TEX261Q6UWH6 196 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 ZNF574Q6ZN55 896 aaPredicted RBP7.67□□□□□ -1.18
PTCD3-201ENST00000254630 GVQW1Q8N7I0 195 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 DPF1Q92782 380 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 TMPRSS5Q9H3S3 457 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 U3KQ87 197 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 B4E171 279 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 GEMIN2O14893 280 aaKnown RBP7.67□□□□□ -1.18
PTCD3-201ENST00000254630 TSPAN7P41732 249 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 MRPS11P82912 194 aaKnown RBP7.67□□□□□ -1.18
PTCD3-201ENST00000254630 LRRTM1Q86UE6 522 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 OR52L2PQ8NGH6 319 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 RPS4Y2Q8TD47 263 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 DDA1Q9BW61 102 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 MYO10Q9HD67 2058 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 FAM24AA6NFZ4 105 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 FAM157AC9JC47 383 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 OGG1O15527 345 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 GSTZ1O43708 216 aaPredicted RBP7.67□□□□□ -1.18
PTCD3-201ENST00000254630 ORM2P19652 201 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 KRTDAPP60985 99 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 COL10A1Q03692 680 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 Q1RN00 199 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 LSMEM1Q8N8F7 131 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 ARID2Q68CP9 1835 aa7.67□□□□□ -1.18
PTCD3-201ENST00000254630 A0A1W2PPQ1 181 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 F5H697 171 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 ZNF205O95201 554 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 COX6B1P14854 86 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 PCMT1P22061 227 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 CDC34P49427 236 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-201ENST00000254630 ZBTB37Q5TC79 503 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 COMMD1Q8N668 190 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 ASB5Q8WWX0 329 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 LOXL4Q96JB6 756 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 UCN2Q96RP3 112 aa7.66□□□□□ -1.18
PTCD3-201ENST00000254630 ATP5SQ99766 215 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms