RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 NDUFB7P17568 137 aa11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 UQCRFS1P47985 274 aa11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 FHITP49789 147 aa11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 WNT3P56703 355 aa11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 ERASQ7Z444 233 aa11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 TDHQ8IZJ6 230 aa11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 GVQW1Q8N7I0 195 aa11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 CLDN23Q96B33 292 aa11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 OR2V2Q96R30 315 aa11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 XIRP1Q702N8 1843 aaKnown RBP11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 LANCL1O43813 399 aa11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 EWSR1Q01844 656 aaKnown RBP eCLIP11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 RIGQ13278 110 aa11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 ZNF77Q15935 545 aa11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 COL24A1Q17RW2 1714 aa11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 OR5AS1Q8N127 324 aa11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 ST8SIA1Q92185 356 aa11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 H1FXQ92522 213 aaKnown RBP11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 ADTRPQ96IZ2 230 aa11.71□□□□□ -0.53
PCDHGA3-201ENST00000253812 TGIF2-C20orf24A0A0A6YYL0 155 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 KCNAB3O43448 404 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 ETHE1O95571 254 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 GLULP15104 373 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 PRDX4Q13162 271 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 KISS1Q15726 138 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 ZDHHC23Q8IYP9 409 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 BCORP1Q8N888 145 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 OR4D9Q8NGE8 314 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 PAGE4O60829 102 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 ICAM2P13598 275 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 ATP6V0CP27449 155 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 CXCL12P48061 93 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 DLX1P56177 255 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 MRPS21P82921 87 aaKnown RBP11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 PARM1Q6UWI2 310 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 TMEM230Q96A57 120 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 MED29Q9NX70 200 aa11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 SOX21Q9Y651 276 aaPredicted RBP11.71□□□□□ -0.54
PCDHGA3-201ENST00000253812 CTXND1A0A1B0GTU2 59 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 PMS2P1A4D2B8 440 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 H3BNC9 293 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 CTAG1AP78358 180 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 HERPUD1Q15011 391 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 SLC35E4Q6ICL7 350 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 SCCPDHQ8NBX0 429 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 PECRQ9BY49 303 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 TMEM210A6NLX4 147 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 OGG1O15527 345 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 RECKO95980 971 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 IGLV3-27P01718 113 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 PPICP45877 212 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 NMUP48645 174 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 SSR4P51571 173 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 ADPRHP54922 357 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 HES1Q14469 280 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 MRGPREQ86SM8 312 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 ZG16BQ96DA0 208 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 KCNE3Q9Y6H6 103 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 COL4A5P29400 1685 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 TRGC1P0CF51 173 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 HIST1H1EP10412 219 aaKnown RBP11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 FAM169BQ8N8A8 192 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 OR8A1Q8NGG7 326 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 LANCL2Q9NS86 450 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 OCIAD1Q9NX40 245 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 PAPPA2Q9BXP8 1791 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 LOC107984156A0A0G2JMH3 177 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 LRRC30A6NM36 301 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 CHST1O43916 411 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 KCNAB1Q14722 419 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 SAMD13Q5VXD3 122 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 ARL17AQ8IVW1 177 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 TECRQ9NZ01 308 aaKnown RBP11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 THAP10Q9P2Z0 257 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 IL19Q9UHD0 177 aa11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 ERRFI1Q9UJM3 462 aaPredicted RBP11.7□□□□□ -0.54
PCDHGA3-201ENST00000253812 RER1O15258 196 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 FGF17O60258 216 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 KLF7O75840 302 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 ST6GAL1P15907 406 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 MDH2P40926 338 aaKnown RBP11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 ACER2Q5QJU3 275 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 VHLLQ6RSH7 139 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 SPNS2Q8IVW8 549 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 PTPMT1Q8WUK0 201 aaPredicted RBP11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 MBD3L1Q8WWY6 194 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 FAM131CQ96AQ9 280 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 TRMT61AQ96FX7 289 aaKnown RBP11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 NRSN2Q9GZP1 204 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 ADAMTSL1Q8N6G6 1762 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 A0A087WUJ7 227 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 RPS16P62249 146 aaKnown RBP11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 SAP30LQ9HAJ7 183 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 C20orf141Q9NUB4 165 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 KCNE5Q9UJ90 142 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 KCNK7Q9Y2U2 307 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 COX6CP09669 75 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 LPAR6P43657 344 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 NPBWR2P48146 333 aa11.69□□□□□ -0.54
PCDHGA3-201ENST00000253812 CEBPDP49716 269 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms