RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 OMGP23515 440 aa18.71■□□□□ 0.59
LSM4-201ENST00000252816 OR3A1P47881 315 aa18.71■□□□□ 0.59
LSM4-201ENST00000252816 ZNF782Q6ZMW2 699 aaPredicted RBP18.71■□□□□ 0.59
LSM4-201ENST00000252816 TPRX1Q8N7U7 411 aa18.71■□□□□ 0.59
LSM4-201ENST00000252816 ORAI1Q96D31 301 aa18.71■□□□□ 0.59
LSM4-201ENST00000252816 PGLYRP3Q96LB9 341 aa18.71■□□□□ 0.59
LSM4-201ENST00000252816 NKX3-1Q99801 234 aaPredicted RBP18.71■□□□□ 0.59
LSM4-201ENST00000252816 GLS2Q9UI32 602 aa18.71■□□□□ 0.59
LSM4-201ENST00000252816 DSCAML1Q8TD84 2053 aa18.7■□□□□ 0.58
LSM4-201ENST00000252816 TRBV5-5A0A0J9YX44 114 aa18.7■□□□□ 0.58
LSM4-201ENST00000252816 SH2D1BO14796 132 aa18.7■□□□□ 0.58
LSM4-201ENST00000252816 OR2H2O95918 312 aa18.7■□□□□ 0.58
LSM4-201ENST00000252816 ZNF728P0DKX0 622 aa18.7■□□□□ 0.58
LSM4-201ENST00000252816 COX7A1P24310 79 aa18.7■□□□□ 0.58
LSM4-201ENST00000252816 RPS11P62280 158 aaKnown RBP eCLIP18.7■□□□□ 0.58
LSM4-201ENST00000252816 RELBQ01201 579 aa18.7■□□□□ 0.58
LSM4-201ENST00000252816 MEF2CQ06413 473 aaPredicted RBP18.7■□□□□ 0.58
LSM4-201ENST00000252816 TAF9Q16594 264 aa18.7■□□□□ 0.58
LSM4-201ENST00000252816 SATL1Q86VE3 508 aa18.7■□□□□ 0.58
LSM4-201ENST00000252816 STX19Q8N4C7 294 aa18.7■□□□□ 0.58
LSM4-201ENST00000252816 HEXA-AS1Q9H8Q6 139 aa18.7■□□□□ 0.58
LSM4-201ENST00000252816 RHOFQ9HBH0 211 aa18.7■□□□□ 0.58
LSM4-201ENST00000252816 EXOSC4Q9NPD3 245 aaKnown RBP18.7■□□□□ 0.58
LSM4-201ENST00000252816 hCG_1809904A0A1W2PP81 198 aa18.69■□□□□ 0.58
LSM4-201ENST00000252816 A0A1W2PPE2 198 aa18.69■□□□□ 0.58
LSM4-201ENST00000252816 A0A1W2PR64 198 aa18.69■□□□□ 0.58
LSM4-201ENST00000252816 A0A1W2PRV1 198 aa18.69■□□□□ 0.58
LSM4-201ENST00000252816 GABRPO00591 440 aa18.69■□□□□ 0.58
LSM4-201ENST00000252816 MGST3O14880 152 aa18.69■□□□□ 0.58
LSM4-201ENST00000252816 PAHP00439 452 aa18.69■□□□□ 0.58
LSM4-201ENST00000252816 MDKP21741 143 aaPredicted RBP18.69■□□□□ 0.58
LSM4-201ENST00000252816 BMXP51813 675 aa18.69■□□□□ 0.58
LSM4-201ENST00000252816 MIDNQ504T8 468 aa18.69■□□□□ 0.58
LSM4-201ENST00000252816 Q6P435 159 aa18.69■□□□□ 0.58
LSM4-201ENST00000252816 PXT1Q8NFP0 134 aa18.69■□□□□ 0.58
LSM4-201ENST00000252816 DPAGT1Q9H3H5 408 aa18.69■□□□□ 0.58
LSM4-201ENST00000252816 C1RLQ9NZP8 487 aa18.69■□□□□ 0.58
LSM4-201ENST00000252816 PNMA8CA0A1B0GUJ8 204 aa18.68■□□□□ 0.58
LSM4-201ENST00000252816 MAGEB3O15480 346 aa18.68■□□□□ 0.58
LSM4-201ENST00000252816 GPR137BO60478 399 aa18.68■□□□□ 0.58
LSM4-201ENST00000252816 LMO1P25800 156 aa18.68■□□□□ 0.58
LSM4-201ENST00000252816 TNFAIP8L1Q8WVP5 186 aa18.68■□□□□ 0.58
LSM4-201ENST00000252816 DYRK2Q92630 601 aa18.68■□□□□ 0.58
LSM4-201ENST00000252816 ZNF714Q96N38 554 aa18.68■□□□□ 0.58
LSM4-201ENST00000252816 GPER1Q99527 375 aa18.68■□□□□ 0.58
LSM4-201ENST00000252816 hADV38S2A0JD32 116 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 H0YJX3 145 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 RBP4P02753 201 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 ALDOBP05062 364 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 CRYBA1P05813 215 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 PAX6P26367 422 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 MTNR1BP49286 362 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 SCN1BQ07699 218 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 YIF1BQ5BJH7 314 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 C6orf141Q5SZD1 244 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 ELP2Q6IA86 826 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 NANOGP1Q8N7R0 232 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 BEND2Q8NDZ0 799 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 PPP1R35Q8TAP8 253 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 CPNE2Q96FN4 548 aaPredicted RBP18.67■□□□□ 0.58
LSM4-201ENST00000252816 ZNF747Q9BV97 191 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 TMEM138Q9NPI0 162 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 LINC00312Q9Y6C7 94 aa18.67■□□□□ 0.58
LSM4-201ENST00000252816 A0A0G2JK05 382 aa18.66■□□□□ 0.58
LSM4-201ENST00000252816 MYL12BO14950 172 aa18.66■□□□□ 0.58
LSM4-201ENST00000252816 IGHV1-8P0DP01 117 aa18.66■□□□□ 0.58
LSM4-201ENST00000252816 ZNF44P15621 663 aa18.66■□□□□ 0.58
LSM4-201ENST00000252816 IGFBP3P17936 291 aaPredicted RBP18.66■□□□□ 0.58
LSM4-201ENST00000252816 ERP29P30040 261 aaKnown RBP18.66■□□□□ 0.58
LSM4-201ENST00000252816 OR3A4PP47883 348 aa18.66■□□□□ 0.58
LSM4-201ENST00000252816 P2RX3P56373 397 aa18.66■□□□□ 0.58
LSM4-201ENST00000252816 WNT4P56705 351 aa18.66■□□□□ 0.58
LSM4-201ENST00000252816 TAS2R43P59537 309 aa18.66■□□□□ 0.58
LSM4-201ENST00000252816 PPP3R1P63098 170 aa18.66■□□□□ 0.58
LSM4-201ENST00000252816 Q499Y3 187 aa18.66■□□□□ 0.58
LSM4-201ENST00000252816 ASCL4Q6XD76 172 aa18.66■□□□□ 0.58
LSM4-201ENST00000252816 OR10K1Q8NGX5 313 aa18.66■□□□□ 0.58
LSM4-201ENST00000252816 SGCDQ92629 289 aa18.66■□□□□ 0.58
LSM4-201ENST00000252816 FAM192AQ9GZU8 254 aa18.66■□□□□ 0.58
LSM4-201ENST00000252816 PPA2Q9H2U2 334 aa18.66■□□□□ 0.58
LSM4-201ENST00000252816 PCDHGB5Q9Y5G0 923 aa18.66■□□□□ 0.58
LSM4-201ENST00000252816 MAGEA13PA6NCF6 341 aa18.65■□□□□ 0.58
LSM4-201ENST00000252816 SLC33A1O00400 549 aaPredicted RBP18.65■□□□□ 0.58
LSM4-201ENST00000252816 CDK1P06493 297 aa18.65■□□□□ 0.58
LSM4-201ENST00000252816 RAG2P55895 527 aa18.65■□□□□ 0.58
LSM4-201ENST00000252816 DDI2Q5TDH0 399 aa18.65■□□□□ 0.58
LSM4-201ENST00000252816 NR1H4Q96RI1 486 aaPredicted RBP18.65■□□□□ 0.58
LSM4-201ENST00000252816 VPREB3Q9UKI3 123 aa18.65■□□□□ 0.58
LSM4-201ENST00000252816 MMP24Q9Y5R2 645 aa18.65■□□□□ 0.58
LSM4-201ENST00000252816 TRAV8-7A0A075B6U6 113 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 TRBV5-7A0A0A0MS05 114 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 A0A1W2PPK0 400 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 PTGES3LE9PB15 166 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 DEGS1O15121 323 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 GPX5O75715 221 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 CDRT1O95170 752 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 NDUFA7O95182 113 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 CELP19835 753 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 BDKRB2P30411 391 aa18.64■□□□□ 0.57
LSM4-201ENST00000252816 PTGFRP43088 359 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms