RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 M0R296 226 aa16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 LRP3O75074 770 aa16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 SS18L1O75177 396 aaPredicted RBP16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 ATG12O94817 140 aa16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 MBPP02686 304 aaPredicted RBP16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 RAB1AP62820 205 aa16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 FAM74A3Q4VXF1 159 aa16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 DHRS13Q6UX07 377 aa16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 MRPL21Q7Z2W9 205 aaKnown RBP16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 MSI2Q96DH6 328 aaKnown RBP16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 C18orf12Q96KH6 178 aa16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 IL36RNQ9UBH0 155 aa16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 FBXL17Q9UF56 701 aa16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 COX5BP10606 129 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 PMELP40967 661 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 MEOX1P50221 254 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 UCP3P55916 312 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 SMCO1Q147U7 214 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 LIAT1Q6ZQX7 453 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 LRTM2Q8N967 370 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 EXTL1Q92935 676 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 APOBEC3DQ96AK3 386 aaPredicted RBP16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 SUCNR1Q9BXA5 334 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 NKX6-2Q9C056 277 aaPredicted RBP16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 MMP26Q9NRE1 261 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 SP1P08047 785 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 TMEM33P57088 247 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 CEACAM21Q3KPI0 293 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 TMEM268Q5VZI3 342 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 OR5T2Q8NGG2 359 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 SMIM8Q96KF7 97 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 POM121L2Q96KW2 1035 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 RSRP1Q9BUV0 290 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 ZNF552Q9H707 407 aaPredicted RBP16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 RNF122Q9H9V4 155 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 MTCH1Q9NZJ7 389 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 PLA2G2EQ9NZK7 142 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 LIPGQ9Y5X9 500 aa16.78■□□□□ 0.28
CDC42EP1-201ENST00000249014 GPR31O00270 319 aa16.77■□□□□ 0.28
CDC42EP1-201ENST00000249014 PPYP01298 95 aa16.77■□□□□ 0.28
CDC42EP1-201ENST00000249014 GLP1RP43220 463 aa16.77■□□□□ 0.28
CDC42EP1-201ENST00000249014 NOVA1P51513 510 aaKnown RBP16.77■□□□□ 0.28
CDC42EP1-201ENST00000249014 CLEC9AQ6UXN8 241 aa16.77■□□□□ 0.28
CDC42EP1-201ENST00000249014 ZDHHC23Q8IYP9 409 aa16.77■□□□□ 0.28
CDC42EP1-201ENST00000249014 WNT2BQ93097 391 aa16.77■□□□□ 0.28
CDC42EP1-201ENST00000249014 SMIM3Q9BZL3 60 aa16.77■□□□□ 0.28
CDC42EP1-201ENST00000249014 TMEM231Q9H6L2 316 aa16.77■□□□□ 0.28
CDC42EP1-201ENST00000249014 BDP1A6H8Y1 2624 aa16.77■□□□□ 0.28
CDC42EP1-201ENST00000249014 ZNF732B4DXR9 585 aa16.77■□□□□ 0.27
CDC42EP1-201ENST00000249014 H7C1Q1 480 aa16.77■□□□□ 0.27
CDC42EP1-201ENST00000249014 DIRAS3O95661 229 aa16.77■□□□□ 0.27
CDC42EP1-201ENST00000249014 CST4P01036 141 aa16.77■□□□□ 0.27
CDC42EP1-201ENST00000249014 FGF12P61328 243 aa16.77■□□□□ 0.27
CDC42EP1-201ENST00000249014 GUCA2BQ16661 112 aa16.77■□□□□ 0.27
CDC42EP1-201ENST00000249014 MDS2Q8NDY4 140 aa16.77■□□□□ 0.27
CDC42EP1-201ENST00000249014 OR52M1Q8NGK5 317 aa16.77■□□□□ 0.27
CDC42EP1-201ENST00000249014 ERGIC1Q969X5 290 aa16.77■□□□□ 0.27
CDC42EP1-201ENST00000249014 HRH4Q9H3N8 390 aa16.77■□□□□ 0.27
CDC42EP1-201ENST00000249014 PRSS50Q9UI38 385 aa16.77■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM90A10PA6NDY2 464 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM90A18PA6NE21 464 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM90A16PA6NEW6 464 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM90A20PA6NIJ5 464 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM90A8PA6NJQ4 464 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM90A7PA6NKC0 464 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM90A22PA8MWA6 464 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM90A12PA8MX19 464 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM90A5PA8MXJ8 464 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM90A23PA8MXZ1 464 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 NME2P1O60361 137 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 TNFSF15O95150 251 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM90A15PP0C7V4 464 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM90A13PP0C7W8 464 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM90A14PP0C7W9 464 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 FAM90A24PP0C7X0 464 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 NME2P22392 152 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 LPAR6P43657 344 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 HERV-K104P61576 105 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 BSCL2Q96G97 398 aaPredicted RBP16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 POM121Q96HA1 1249 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 TP53RKQ96S44 253 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 TSNAXQ99598 290 aaKnown RBP16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 SYT3Q9BQG1 590 aa16.76■□□□□ 0.27
CDC42EP1-201ENST00000249014 CDK2AP1O14519 115 aa16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 PHF1O43189 567 aaPredicted RBP16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 LILRA1O75019 489 aa16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 FBXO24O75426 580 aa16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 SPINK2P20155 84 aa16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 EIF5AP63241 154 aaKnown RBP16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 PJVKQ0ZLH3 352 aa16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 SAXO1Q8IYX7 474 aa16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 PUSL1Q8N0Z8 303 aaKnown RBP16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 SAT2Q96F10 170 aaPredicted RBP16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 FRYQ5TBA9 3013 aa16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 NUDT19A8MXV4 375 aa16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 ARR3P36575 388 aa16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 RNPS1Q15287 305 aaKnown RBP16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 ATP1A1-AS1Q5TC04 95 aa16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 HES3Q5TGS1 186 aa16.75■□□□□ 0.27
CDC42EP1-201ENST00000249014 IL34Q6ZMJ4 242 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms