RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 Q6ZSR3 168 aa13.61□□□□□ -0.23
LRFN1-201ENST00000248668 STX12Q86Y82 276 aa13.61□□□□□ -0.23
LRFN1-201ENST00000248668 ZNF442Q9H7R0 627 aa13.61□□□□□ -0.23
LRFN1-201ENST00000248668 IL36RNQ9UBH0 155 aa13.61□□□□□ -0.23
LRFN1-201ENST00000248668 ANXA10Q9UJ72 324 aa13.61□□□□□ -0.23
LRFN1-201ENST00000248668 MRPS18CQ9Y3D5 142 aaKnown RBP13.61□□□□□ -0.23
LRFN1-201ENST00000248668 MSGN1A6NI15 193 aa13.61□□□□□ -0.23
LRFN1-201ENST00000248668 CRYBA1P05813 215 aa13.61□□□□□ -0.23
LRFN1-201ENST00000248668 RNFT1Q5M7Z0 435 aa13.61□□□□□ -0.23
LRFN1-201ENST00000248668 F8VVB4 439 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 F8VWA3 439 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 BCL2L11O43521 198 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 RAB1AP62820 205 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 PHLDA2Q53GA4 152 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 SLC22A25Q6T423 547 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 PEG10Q86TG7 708 aaKnown RBP13.6□□□□□ -0.23
LRFN1-201ENST00000248668 SLAMF9Q96A28 289 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 IGHV3-64DA0A0J9YX35 117 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 OR2F2O95006 317 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 SLC25A4P12235 298 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 CHATP28329 748 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 ARG2P78540 354 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 OR2F1Q13607 317 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 RAB32Q13637 225 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 SPATA46Q5T0L3 261 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 RNF126Q9BV68 326 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 OR2S2Q9NQN1 319 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 STARD10Q9Y365 291 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 MGAQ8IWI9 3026 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 FCGR3AP08637 254 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 HLA-GP17693 338 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 FUT6P51993 359 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 UBA52P62987 128 aaKnown RBP13.6□□□□□ -0.23
LRFN1-201ENST00000248668 SMCO1Q147U7 214 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 TMEM42Q69YG0 159 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 ZNF565Q8N9K5 539 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 ASB13Q8WXK3 278 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.6□□□□□ -0.23
LRFN1-201ENST00000248668 PARPBPQ9NWS1 579 aa13.6□□□□□ -0.23
LRFN1-201ENST00000248668 NBEAQ8NFP9 2946 aa13.59□□□□□ -0.23
LRFN1-201ENST00000248668 RPS2P15880 293 aaKnown RBP13.59□□□□□ -0.23
LRFN1-201ENST00000248668 SRSF4Q08170 494 aaKnown RBP13.59□□□□□ -0.23
LRFN1-201ENST00000248668 TRIP6Q15654 476 aaKnown RBP13.59□□□□□ -0.23
LRFN1-201ENST00000248668 KRTAP27-1Q3LI81 207 aa13.59□□□□□ -0.23
LRFN1-201ENST00000248668 MRPL21Q7Z2W9 205 aaKnown RBP13.59□□□□□ -0.23
LRFN1-201ENST00000248668 TMEM45BQ96B21 275 aa13.59□□□□□ -0.23
LRFN1-201ENST00000248668 SCGB3A2Q96PL1 93 aa13.59□□□□□ -0.23
LRFN1-201ENST00000248668 IGKV3D-15A0A087WSY6 115 aa13.59□□□□□ -0.23
LRFN1-201ENST00000248668 CASP6P55212 293 aa13.59□□□□□ -0.23
LRFN1-201ENST00000248668 OR8B8Q15620 311 aa13.59□□□□□ -0.23
LRFN1-201ENST00000248668 C1QTNF5Q9BXJ0 243 aa13.59□□□□□ -0.23
LRFN1-201ENST00000248668 FGF23Q9GZV9 251 aaPredicted RBP13.59□□□□□ -0.23
LRFN1-201ENST00000248668 SPAARA0A1B0GVQ0 90 aa13.58□□□□□ -0.23
LRFN1-201ENST00000248668 XRCC2O43543 280 aa13.58□□□□□ -0.23
LRFN1-201ENST00000248668 WISP2O76076 250 aa13.58□□□□□ -0.23
LRFN1-201ENST00000248668 RBMXP38159 391 aaKnown RBP13.58□□□□□ -0.23
LRFN1-201ENST00000248668 PRDX4Q13162 271 aa13.58□□□□□ -0.23
LRFN1-201ENST00000248668 SLC10A1Q14973 349 aa13.58□□□□□ -0.23
LRFN1-201ENST00000248668 PIEZO2Q9H5I5 2752 aa13.58□□□□□ -0.23
LRFN1-201ENST00000248668 PQLC2LA1A4F0 135 aa13.58□□□□□ -0.24
LRFN1-201ENST00000248668 LILRA1O75019 489 aa13.58□□□□□ -0.24
LRFN1-201ENST00000248668 SCGB1D2O95969 90 aa13.58□□□□□ -0.24
LRFN1-201ENST00000248668 BCL3P20749 454 aa13.58□□□□□ -0.24
LRFN1-201ENST00000248668 DEFB124Q8NES8 71 aa13.58□□□□□ -0.24
LRFN1-201ENST00000248668 LOXL4Q96JB6 756 aa13.58□□□□□ -0.24
LRFN1-201ENST00000248668 ZNF488Q96MN9 340 aa13.58□□□□□ -0.24
LRFN1-201ENST00000248668 BCO1Q9HAY6 547 aa13.58□□□□□ -0.24
LRFN1-201ENST00000248668 FCGR2CP31995 323 aa13.58□□□□□ -0.24
LRFN1-201ENST00000248668 PIGPP57054 158 aa13.58□□□□□ -0.24
LRFN1-201ENST00000248668 EIF3IQ13347 325 aaKnown RBP13.58□□□□□ -0.24
LRFN1-201ENST00000248668 GCNT2Q8N0V5 402 aa13.58□□□□□ -0.24
LRFN1-201ENST00000248668 CCDC54Q8NEL0 328 aa13.58□□□□□ -0.24
LRFN1-201ENST00000248668 CPNE2Q96FN4 548 aaPredicted RBP13.58□□□□□ -0.24
LRFN1-201ENST00000248668 RHOVQ96L33 236 aa13.58□□□□□ -0.24
LRFN1-201ENST00000248668 FER1L6-AS2Q96M78 137 aa13.58□□□□□ -0.24
LRFN1-201ENST00000248668 RGCCQ9H4X1 137 aa13.58□□□□□ -0.24
LRFN1-201ENST00000248668 NKX2-8O15522 239 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 SNAPC5O75971 98 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 NOVA1P51513 510 aaKnown RBP13.57□□□□□ -0.24
LRFN1-201ENST00000248668 Q6ZPA2 131 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 ZNF552Q9H707 407 aaPredicted RBP13.57□□□□□ -0.24
LRFN1-201ENST00000248668 KLF13Q9Y2Y9 288 aaPredicted RBP13.57□□□□□ -0.24
LRFN1-201ENST00000248668 MED12LQ86YW9 2145 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 CEACAM18A8MTB9 384 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 KLRC4-KLRK1H3BQV0 150 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 NME2P1O60361 137 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 IFNA2P01563 188 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 NME2P22392 152 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 NFYBP25208 207 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 ARL6IP1Q15041 203 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 OR5L1Q8NGL2 311 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 OR11L1Q8NGX0 322 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 NEK7Q8TDX7 302 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 GLYATL2Q8WU03 294 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 GPHA2Q96T91 129 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 TMEM231Q9H6L2 316 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 RAB18Q9NP72 206 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 CCL11P51671 97 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 MALLQ13021 153 aa13.57□□□□□ -0.24
LRFN1-201ENST00000248668 ZNF345Q14585 488 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms