RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 FAM157CP0CG43 387 aa10.94□□□□□ -0.66
RAB3IP-201ENST00000247833 FUT6P51993 359 aa10.94□□□□□ -0.66
RAB3IP-201ENST00000247833 RAB5BP61020 215 aa10.94□□□□□ -0.66
RAB3IP-201ENST00000247833 POLR2GP62487 172 aaKnown RBP eCLIP10.94□□□□□ -0.66
RAB3IP-201ENST00000247833 C3AR1Q16581 482 aa10.94□□□□□ -0.66
RAB3IP-201ENST00000247833 ABHD17BQ5VST6 288 aa10.94□□□□□ -0.66
RAB3IP-201ENST00000247833 CALHM1Q8IU99 346 aa10.94□□□□□ -0.66
RAB3IP-201ENST00000247833 ZNF100Q8IYN0 542 aa10.94□□□□□ -0.66
RAB3IP-201ENST00000247833 SAT2Q96F10 170 aaPredicted RBP10.94□□□□□ -0.66
RAB3IP-201ENST00000247833 SH3BGRL3Q9H299 93 aa10.94□□□□□ -0.66
RAB3IP-201ENST00000247833 LIME1Q9H400 295 aa10.94□□□□□ -0.66
RAB3IP-201ENST00000247833 C12orf49Q9H741 205 aa10.94□□□□□ -0.66
RAB3IP-201ENST00000247833 PILRBQ9UKJ0 227 aa10.94□□□□□ -0.66
RAB3IP-201ENST00000247833 IGKV1-12A0A0C4DH73 117 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 OR6C6A6NF89 314 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 SYNGR4O95473 234 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 IGKV1D-12P01611 117 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 RPS2P15880 293 aaKnown RBP10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 FUT3P21217 361 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 NTF4P34130 210 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 ZFP62Q8NB50 900 aaPredicted RBP10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 C12orf57Q99622 126 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 TM2D1Q9BX74 207 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 PLEKHA2Q9HB19 425 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 PMS2P1A4D2B8 440 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 CNOT4O95628 575 aaKnown RBP10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 S100A9P06702 114 aaKnown RBP10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 CHATP28329 748 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 NKX2-1P43699 371 aaPredicted RBP10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 TSC22D1Q15714 1073 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 ADAM5Q6NVV9 412 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 DHRS11Q6UWP2 260 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 SLC35G3Q8N808 338 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 M1APQ8TC57 530 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 RCC2Q9P258 522 aaKnown RBP10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 C1orf196B1AJZ1 125 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 TRAPPC2LH3BP13 241 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 GPR37O15354 613 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 SYNGR3O43761 229 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 RAB13P51153 203 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 PLP2Q04941 152 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 STK11Q15831 433 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 GUK1Q16774 197 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 SPATA46Q5T0L3 261 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 DPPA2Q7Z7J5 298 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 GPR35Q9HC97 309 aa10.93□□□□□ -0.66
RAB3IP-201ENST00000247833 CPAMD8Q8IZJ3 1885 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 TRAV39A0A0B4J263 110 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 CDRT15L2A8MXV6 281 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 CST2P09228 141 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 SULT1A2P50226 295 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 LIAT1Q6ZQX7 453 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 MKXQ8IYA7 352 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 OR2G3Q8NGZ4 309 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 CPT1CQ8TCG5 803 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 ZNF488Q96MN9 340 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 HES7Q9BYE0 225 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 WNT5BQ9H1J7 359 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 PROK2Q9HC23 129 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 SMCO4Q9NRQ5 59 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 FAM86C1Q9NVL1 165 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 TCFL5Q9UL49 500 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 ZNF175Q9Y473 711 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 NKX2-6A6NCS4 301 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 NUDT19A8MXV4 375 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 ZNF732B4DXR9 585 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 CER1O95813 267 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 PPYP01298 95 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 EDN3P14138 238 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 CTSSP25774 331 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 OR2B8PP59922 312 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 FAM3AP98173 230 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 CLCC1Q96S66 551 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 SLC7A10Q9NS82 523 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 KCNS2Q9ULS6 477 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 LOXL2Q9Y4K0 774 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 DOCK10Q96BY6 2186 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 ADAMTS9Q9P2N4 1935 aa10.92□□□□□ -0.66
RAB3IP-201ENST00000247833 UMAD1C9J7I0 102 aa10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 ZNF587BE7ETH6 402 aa10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 ARG1P05089 322 aa10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 BCL3P20749 454 aa10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 DVL1P1P54792 670 aaPredicted RBP10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 MST1LQ2TV78 715 aa10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 SUCNR1Q9BXA5 334 aa10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 IL36RNQ9UBH0 155 aa10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 FOXD3Q9UJU5 478 aaPredicted RBP10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 RFNGQ9Y644 331 aa10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 HAGHQ16775 308 aa10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 KCNE4Q8WWG9 221 aa10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 BOKQ9UMX3 212 aaPredicted RBP10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 C9JQL5 133 aa10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 GLAP06280 429 aa10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 SNRPEP62304 92 aaKnown RBP10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 PRDX4Q13162 271 aa10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 TUSC5Q8IXB3 177 aa10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 TP53RKQ96S44 253 aa10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 SF3B5Q9BWJ5 86 aaKnown RBP10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 C19orf12Q9NSK7 152 aa10.91□□□□□ -0.66
RAB3IP-201ENST00000247833 C3orf85A0A1B0GTC6 90 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms