RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 PHYHIPQ92561 330 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 TMEM203Q969S6 136 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 PPP1R3EQ9H7J1 279 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 ABCB9Q9NP78 766 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 MRPL15Q9P015 296 aaKnown RBP11.23□□□□□ -0.61
DDX39A-201ENST00000242776 KAAG1Q9UBP8 84 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 SSR3Q9UNL2 185 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 COL7A1Q02388 2944 aa11.22□□□□□ -0.61
DDX39A-201ENST00000242776 A0A1W2PQ09 198 aa11.22□□□□□ -0.61
DDX39A-201ENST00000242776 A0A1W2PRX2 142 aa11.22□□□□□ -0.61
DDX39A-201ENST00000242776 PTBP3O95758 552 aaKnown RBP11.22□□□□□ -0.61
DDX39A-201ENST00000242776 LHBP01229 141 aa11.22□□□□□ -0.61
DDX39A-201ENST00000242776 GNALP38405 381 aa11.22□□□□□ -0.61
DDX39A-201ENST00000242776 ACSM3Q53FZ2 586 aa11.22□□□□□ -0.61
DDX39A-201ENST00000242776 PLA1AQ53H76 456 aa11.22□□□□□ -0.61
DDX39A-201ENST00000242776 METAP1DQ6UB28 335 aaPredicted RBP11.22□□□□□ -0.61
DDX39A-201ENST00000242776 SLC36A1Q7Z2H8 476 aa11.22□□□□□ -0.61
DDX39A-201ENST00000242776 C11orf53Q8IXP5 236 aa11.22□□□□□ -0.61
DDX39A-201ENST00000242776 OR13C5Q8NGS8 318 aa11.22□□□□□ -0.61
DDX39A-201ENST00000242776 PP6455Q8WZ26 134 aa11.22□□□□□ -0.61
DDX39A-201ENST00000242776 TNFRSF14Q92956 283 aa11.22□□□□□ -0.61
DDX39A-201ENST00000242776 TMEM106AQ96A25 262 aa11.22□□□□□ -0.61
DDX39A-201ENST00000242776 DCTN5Q9BTE1 182 aa11.22□□□□□ -0.61
DDX39A-201ENST00000242776 ELL3Q9HB65 397 aaPredicted RBP11.22□□□□□ -0.61
DDX39A-201ENST00000242776 C14orf119Q9NWQ9 140 aa11.22□□□□□ -0.61
DDX39A-201ENST00000242776 CKLFQ9UBR5 152 aa11.22□□□□□ -0.61
DDX39A-201ENST00000242776 SF3B6Q9Y3B4 125 aaKnown RBP11.22□□□□□ -0.61
DDX39A-201ENST00000242776 GABRPO00591 440 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 ANGPTL7O43827 346 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 CHST1O43916 411 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 FAHP16930 419 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 AMY2BP19961 511 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 ACKR3P25106 362 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 SOX2P48431 317 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 BMXP51813 675 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 RPS11P62280 158 aaKnown RBP eCLIP11.21□□□□□ -0.61
DDX39A-201ENST00000242776 LRRC10Q5BKY1 277 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 SERPINA12Q8IW75 414 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 BEND2Q8NDZ0 799 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 YIPF6Q96EC8 236 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 OR14A2Q96R54 314 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 CITED2Q99967 270 aaPredicted RBP11.21□□□□□ -0.61
DDX39A-201ENST00000242776 PAPOLGQ9BWT3 736 aaKnown RBP11.21□□□□□ -0.61
DDX39A-201ENST00000242776 NEK6Q9HC98 313 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 EXOSC4Q9NPD3 245 aaKnown RBP11.21□□□□□ -0.61
DDX39A-201ENST00000242776 GSTK1Q9Y2Q3 226 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 MAB21L2Q9Y586 359 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 MPC1Q9Y5U8 109 aa11.21□□□□□ -0.61
DDX39A-201ENST00000242776 TRDV1A0A1B0GX56 115 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 ANXA2P2A6NMY6 339 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.2□□□□□ -0.62
DDX39A-201ENST00000242776 K7EIL1 84 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 NOL3O60936 208 aaKnown RBP11.2□□□□□ -0.62
DDX39A-201ENST00000242776 SC5DO75845 299 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 ARL6IP5O75915 188 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 CST4P01036 141 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 NDUFB7P17568 137 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 CD33P20138 364 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 UBE2E1P51965 193 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 FABP5Q01469 135 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 CNN3Q15417 329 aaKnown RBP11.2□□□□□ -0.62
DDX39A-201ENST00000242776 LRRC75BQ2VPJ9 315 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 CLVS2Q5SYC1 327 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 CD200R1LQ6Q8B3 271 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 CEACAM19Q7Z692 300 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 PARP16Q8N5Y8 322 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 OR5D14Q8NGL3 314 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 PIGCQ92535 297 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 FGGYQ96C11 551 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 DERL3Q96Q80 235 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 CHST5Q9GZS9 411 aa11.2□□□□□ -0.62
DDX39A-201ENST00000242776 CDIPTO14735 213 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 AIREO43918 545 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 NRASP01111 189 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 OCMP0CE72 109 aaPredicted RBP11.19□□□□□ -0.62
DDX39A-201ENST00000242776 MUC1P15941 1255 aaPredicted RBP11.19□□□□□ -0.62
DDX39A-201ENST00000242776 FSTP19883 344 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 GADD45AP24522 165 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 PPP3R1P63098 170 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 MZT1Q08AG7 82 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 BLMHQ13867 455 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 HSD17B12Q53GQ0 312 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 C11orf88Q6PI97 169 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 WDR82Q6UXN9 313 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 UNQ9370/PRO34162Q6UXP9 181 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 UTS2BQ765I0 119 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 ZDHHC23Q8IYP9 409 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 OR1M1Q8NGA1 313 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 ADAT3Q96EY9 351 aaPredicted RBP11.19□□□□□ -0.62
DDX39A-201ENST00000242776 HIST1H2AAQ96QV6 131 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 FUNDC2Q9BWH2 189 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 FAM234AQ9H0X4 552 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 WDR13Q9H1Z4 485 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 ZCCHC4Q9H5U6 513 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 RHBDD3Q9Y3P4 386 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 TRBV5-7A0A0A0MS05 114 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 LOC100506127A0A0U1RQW1 187 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 NKX6-3A6NJ46 265 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 UCHL1P09936 223 aa11.19□□□□□ -0.62
DDX39A-201ENST00000242776 MYL9P24844 172 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms