RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 TSPAN9O75954 239 aa11.53□□□□□ -0.56
GPN3-201ENST00000228827 CLPXO76031 633 aa11.53□□□□□ -0.56
GPN3-201ENST00000228827 ZNF44P15621 663 aa11.53□□□□□ -0.56
GPN3-201ENST00000228827 KISS1Q15726 138 aa11.53□□□□□ -0.56
GPN3-201ENST00000228827 OR2G6Q5TZ20 316 aa11.53□□□□□ -0.56
GPN3-201ENST00000228827 XAF1Q6GPH4 301 aa11.53□□□□□ -0.56
GPN3-201ENST00000228827 PPP1R35Q8TAP8 253 aa11.53□□□□□ -0.56
GPN3-201ENST00000228827 RGP1Q92546 391 aaPredicted RBP11.53□□□□□ -0.56
GPN3-201ENST00000228827 SEBOXQ9HB31 216 aaPredicted RBP11.53□□□□□ -0.56
GPN3-201ENST00000228827 TCF7L1Q9HCS4 588 aa11.53□□□□□ -0.56
GPN3-201ENST00000228827 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.53□□□□□ -0.56
GPN3-201ENST00000228827 SIGLEC9Q9Y336 463 aa11.53□□□□□ -0.56
GPN3-201ENST00000228827 PCDHGB5Q9Y5G0 923 aa11.53□□□□□ -0.56
GPN3-201ENST00000228827 LINC00312Q9Y6C7 94 aa11.53□□□□□ -0.56
GPN3-201ENST00000228827 ODF3BA8MYP8 253 aa11.52□□□□□ -0.56
GPN3-201ENST00000228827 RBP4P02753 201 aa11.52□□□□□ -0.56
GPN3-201ENST00000228827 RPSAP08865 295 aaKnown RBP11.52□□□□□ -0.56
GPN3-201ENST00000228827 RAB13P51153 203 aa11.52□□□□□ -0.56
GPN3-201ENST00000228827 P2RX3P56373 397 aa11.52□□□□□ -0.56
GPN3-201ENST00000228827 ZP1P60852 638 aa11.52□□□□□ -0.56
GPN3-201ENST00000228827 RCN1Q15293 331 aa11.52□□□□□ -0.56
GPN3-201ENST00000228827 FAM189A2Q15884 450 aa11.52□□□□□ -0.56
GPN3-201ENST00000228827 LDLRAD2Q5SZI1 272 aa11.52□□□□□ -0.56
GPN3-201ENST00000228827 SATL1Q86VE3 508 aa11.52□□□□□ -0.56
GPN3-201ENST00000228827 PARP16Q8N5Y8 322 aa11.52□□□□□ -0.56
GPN3-201ENST00000228827 OR51A2Q8NGJ7 313 aa11.52□□□□□ -0.56
GPN3-201ENST00000228827 PIFOQ8TCI5 191 aa11.52□□□□□ -0.56
GPN3-201ENST00000228827 NKX3-1Q99801 234 aaPredicted RBP11.52□□□□□ -0.56
GPN3-201ENST00000228827 TAS2R4Q9NYW5 299 aa11.52□□□□□ -0.56
GPN3-201ENST00000228827 SESN1Q9Y6P5 492 aa11.52□□□□□ -0.56
GPN3-201ENST00000228827 FAM90A8PA6NJQ4 464 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 MMP23AO75900 390 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 RAB3AP20336 220 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 DCKP27707 260 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 GABRA5P31644 462 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 GLIPR1P48060 266 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 AESQ08117 197 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 SSX2Q16385 188 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 PRAMEF5Q5TYX0 476 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 TTC23Q5W5X9 447 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 ZNF626Q68DY1 528 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 RPL22L1Q6P5R6 122 aaKnown RBP11.51□□□□□ -0.57
GPN3-201ENST00000228827 TMPRSS11AQ6ZMR5 421 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 SAXO1Q8IYX7 474 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 OR11H6Q8NGC7 330 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 NR1H4Q96RI1 486 aaPredicted RBP11.51□□□□□ -0.57
GPN3-201ENST00000228827 GPER1Q99527 375 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 JAM3Q9BX67 310 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 CLEC2DQ9UHP7 191 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 TBL2Q9Y4P3 447 aaKnown RBP11.51□□□□□ -0.57
GPN3-201ENST00000228827 SIRT4Q9Y6E7 314 aaPredicted RBP11.51□□□□□ -0.57
GPN3-201ENST00000228827 IGHV2-26A0A0B4J1V2 119 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 A0A0G2JK05 382 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 ANKRD65E5RJM6 399 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 DEGS1O15121 323 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 MAGEB3O15480 346 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 CHST1O43916 411 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 ALX3O95076 343 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 JUNBP17275 347 aaPredicted RBP11.51□□□□□ -0.57
GPN3-201ENST00000228827 ERP29P30040 261 aaKnown RBP11.51□□□□□ -0.57
GPN3-201ENST00000228827 CDK5R1Q15078 307 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 AANATQ16613 207 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 ASPHD2Q6ICH7 369 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 Q6P435 159 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 BAIAP2L2Q6UXY1 529 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 DHRSXQ8N5I4 330 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 OR4C13Q8NGP0 309 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 OR10K1Q8NGX5 313 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 NDNFQ8TB73 568 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 HAVCR2Q8TDQ0 301 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 GPR148Q8TDV2 347 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 TNFAIP8L1Q8WVP5 186 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 FOXRED1Q96CU9 486 aaPredicted RBP11.51□□□□□ -0.57
GPN3-201ENST00000228827 FAM192AQ9GZU8 254 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 TMEM133Q9H2Q1 129 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 ABCB10Q9NRK6 738 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 DIMT1Q9UNQ2 313 aaKnown RBP11.51□□□□□ -0.57
GPN3-201ENST00000228827 EXOSC1Q9Y3B2 195 aaKnown RBP11.51□□□□□ -0.57
GPN3-201ENST00000228827 HILPDAQ9Y5L2 63 aa11.51□□□□□ -0.57
GPN3-201ENST00000228827 TRRAPQ9Y4A5 3859 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 TRGV10A0A0A0MS01 117 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 IRGMA1A4Y4 181 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 FAM172BPA6NC97 362 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 M0QZ24 198 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 SLC33A1O00400 549 aaPredicted RBP11.5□□□□□ -0.57
GPN3-201ENST00000228827 GABRPO00591 440 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 HSPB6O14558 160 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 TIMM23O14925 209 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 MYL12AP19105 171 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 ADARB1P78563 741 aaKnown RBP11.5□□□□□ -0.57
GPN3-201ENST00000228827 ATXN7L3Q14CW9 347 aaPredicted RBP11.5□□□□□ -0.57
GPN3-201ENST00000228827 CCDC58Q4VC31 144 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 HIST2H2BDQ6DRA6 164 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 TMEM219Q86XT9 240 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 PACRGLQ8N7B6 248 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 SETD9Q8NE22 299 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 OR13C5Q8NGS8 318 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 ORAI1Q96D31 301 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 MALSU1Q96EH3 234 aa11.5□□□□□ -0.57
GPN3-201ENST00000228827 TMEM80Q96HE8 168 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms