RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 A6NCN8 305 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 MGST1P10620 155 aaKnown RBP12.07□□□□□ -0.48
NFKB1-201ENST00000226574 RPS2P15880 293 aaKnown RBP12.07□□□□□ -0.48
NFKB1-201ENST00000226574 SNCAP37840 140 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 DYNLT3P51808 116 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 HLA-BQ31612 363 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 NCR3LG1Q68D85 454 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 H2BFWTQ7Z2G1 175 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 SLC25A22Q9H936 323 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 TNS1Q9HBL0 1735 aaKnown RBP12.07□□□□□ -0.48
NFKB1-201ENST00000226574 RAMP1O60894 148 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 CCL4P13236 92 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 MMP9P14780 707 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 SRSF3P84103 164 aaKnown RBP12.07□□□□□ -0.48
NFKB1-201ENST00000226574 FAHD2BQ6P2I3 314 aaPredicted RBP12.07□□□□□ -0.48
NFKB1-201ENST00000226574 C1QL2Q7Z5L3 287 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 OR1K1Q8NGR3 316 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 OR13D1Q8NGV5 346 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 ERGIC1Q969X5 290 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 FAHD2AQ96GK7 314 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 CCL28Q9NRJ3 127 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 GPR132Q9UNW8 380 aa12.07□□□□□ -0.48
NFKB1-201ENST00000226574 MDFIC2A0A1B0GVS7 189 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 ARGFXA6NJG6 315 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 MS4A18H0YCH9 400 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 PDCD6O75340 191 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 CCL3P10147 92 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 SLC25A4P12235 298 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 KLK2P20151 261 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 CA6P23280 308 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 CHRNA7P36544 502 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 MS4A18Q3C1V0 323 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 STPG1Q5TH74 334 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 FAM185AQ8N0U4 392 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 SPSB1Q96BD6 273 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 GPX7Q96SL4 187 aaPredicted RBP12.06□□□□□ -0.48
NFKB1-201ENST00000226574 DUSP15Q9H1R2 295 aaPredicted RBP12.06□□□□□ -0.48
NFKB1-201ENST00000226574 MSL2Q9HCI7 577 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 HEATR1Q9H583 2144 aaKnown RBP12.06□□□□□ -0.48
NFKB1-201ENST00000226574 TRAV14DV4A0A0A6YYC5 116 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 RBFOX3A6NFN3 312 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 A8MXE2 369 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 H0Y8G0 127 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 AP4M1O00189 453 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 CBR3O75828 277 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 HOXC4P09017 264 aaPredicted RBP12.06□□□□□ -0.48
NFKB1-201ENST00000226574 FUT6P51993 359 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 ZDHHC23Q8IYP9 409 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 GCNT2Q8N0V5 402 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 ADAM19Q9H013 955 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 RALGAPA2Q2PPJ7 1873 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 ZNF320A2RRD8 509 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 SRFP11831 508 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 ZNF345Q14585 488 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 PLAC9Q5JTB6 97 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 DHRS11Q6UWP2 260 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 GAPTQ8N292 157 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 OR4A16Q8NH70 328 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 ABHD5Q8WTS1 349 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 POM121Q96HA1 1249 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 SLC26A1Q9H2B4 701 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 TMED3Q9Y3Q3 217 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 DHRS7CA6NNS2 312 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 ERVS71-1P61550 626 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 ROM1Q03395 351 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 EXT1Q16394 746 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 PRAMEF5Q5TYX0 476 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 PRAMEF6Q5VXH4 476 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 TBC1D26Q86UD7 250 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 SKA3Q8IX90 412 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 COMMD1Q8N668 190 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 FAM210BQ96KR6 192 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 ZNF488Q96MN9 340 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 FAM103A1Q9BTL3 118 aaKnown RBP12.06□□□□□ -0.48
NFKB1-201ENST00000226574 CRISPLD2Q9H0B8 497 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 OCIAD1Q9NX40 245 aa12.06□□□□□ -0.48
NFKB1-201ENST00000226574 ZNF407Q9C0G0 2248 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 MTCL1Q9Y4B5 1905 aaKnown RBP12.05□□□□□ -0.48
NFKB1-201ENST00000226574 SCN8AQ9UQD0 1980 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 A8MXK9 166 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 NTF3P20783 257 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 ATP6V0CP27449 155 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 PPP1CCP36873 323 aaKnown RBP12.05□□□□□ -0.48
NFKB1-201ENST00000226574 HOXA1P49639 335 aaPredicted RBP12.05□□□□□ -0.48
NFKB1-201ENST00000226574 SUMO3P55854 103 aaPredicted RBP12.05□□□□□ -0.48
NFKB1-201ENST00000226574 H3F3AP84243 136 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 UNC119Q13432 240 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 ALKBH6Q3KRA9 238 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 MYPOPQ86VE0 399 aaPredicted RBP12.05□□□□□ -0.48
NFKB1-201ENST00000226574 HOGA1Q86XE5 327 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 SLC35G3Q8N808 338 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 OR10P1Q8NGE3 313 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 OR10V1Q8NGI7 309 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 OR6X1Q8NH79 312 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 J3QRE1 110 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 MMP7P09237 267 aaPredicted RBP12.05□□□□□ -0.48
NFKB1-201ENST00000226574 CD200P41217 278 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 GABRA4P48169 554 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 C3AR1Q16581 482 aa12.05□□□□□ -0.48
NFKB1-201ENST00000226574 ABHD3Q8WU67 409 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms