RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 TDGF1P3P51864 188 aa14.84□□□□□ -0.03
VRK1-201ENST00000216639 BAMBIQ13145 260 aa14.84□□□□□ -0.03
VRK1-201ENST00000216639 RBM39Q14498 530 aaKnown RBP14.84□□□□□ -0.03
VRK1-201ENST00000216639 DAZAP2Q15038 168 aaPredicted RBP14.84□□□□□ -0.03
VRK1-201ENST00000216639 C3orf36Q3SXR2 165 aa14.84□□□□□ -0.03
VRK1-201ENST00000216639 LY6G6FQ5SQ64 297 aa14.84□□□□□ -0.03
VRK1-201ENST00000216639 DHRS11Q6UWP2 260 aa14.84□□□□□ -0.03
VRK1-201ENST00000216639 PIGMQ9H3S5 423 aa14.84□□□□□ -0.03
VRK1-201ENST00000216639 URB1O60287 2271 aaKnown RBP14.84□□□□□ -0.03
VRK1-201ENST00000216639 A0A0B4J2A0 478 aa14.83□□□□□ -0.03
VRK1-201ENST00000216639 HMSDA8MTL9 139 aa14.83□□□□□ -0.03
VRK1-201ENST00000216639 TIMM8AO60220 97 aaPredicted RBP14.83□□□□□ -0.03
VRK1-201ENST00000216639 KITLGP21583 273 aa14.83□□□□□ -0.03
VRK1-201ENST00000216639 SRSF4Q08170 494 aaKnown RBP14.83□□□□□ -0.03
VRK1-201ENST00000216639 Q6ZS49 121 aa14.83□□□□□ -0.03
VRK1-201ENST00000216639 KCTD9Q7L273 389 aa14.83□□□□□ -0.03
VRK1-201ENST00000216639 Q8NA96 180 aa14.83□□□□□ -0.03
VRK1-201ENST00000216639 SCCPDHQ8NBX0 429 aa14.83□□□□□ -0.03
VRK1-201ENST00000216639 GTF3AQ92664 365 aaKnown RBP14.83□□□□□ -0.03
VRK1-201ENST00000216639 TMEM230Q96A57 120 aa14.83□□□□□ -0.03
VRK1-201ENST00000216639 S100PBPQ96BU1 408 aa14.83□□□□□ -0.03
VRK1-201ENST00000216639 HS3ST6Q96QI5 342 aa14.83□□□□□ -0.03
VRK1-201ENST00000216639 SLX1AQ9BQ83 275 aa14.83□□□□□ -0.03
VRK1-201ENST00000216639 DECR2Q9NUI1 292 aa14.83□□□□□ -0.03
VRK1-201ENST00000216639 COMMD9Q9P000 198 aa14.83□□□□□ -0.03
VRK1-201ENST00000216639 SHPKQ9UHJ6 478 aa14.83□□□□□ -0.03
VRK1-201ENST00000216639 GTF3C1Q12789 2109 aa14.83□□□□□ -0.04
VRK1-201ENST00000216639 L7N2F9 121 aa14.83□□□□□ -0.04
VRK1-201ENST00000216639 RHBDL1O75783 438 aa14.83□□□□□ -0.04
VRK1-201ENST00000216639 CTSDP07339 412 aaPredicted RBP14.83□□□□□ -0.04
VRK1-201ENST00000216639 ALKBH6Q3KRA9 238 aa14.83□□□□□ -0.04
VRK1-201ENST00000216639 MBNL2Q5VZF2 373 aaKnown RBP14.83□□□□□ -0.04
VRK1-201ENST00000216639 ZNF660Q6AZW8 331 aaPredicted RBP14.83□□□□□ -0.04
VRK1-201ENST00000216639 GFRALQ6UXV0 394 aa14.83□□□□□ -0.04
VRK1-201ENST00000216639 SPERTQ8NA61 448 aa14.83□□□□□ -0.04
VRK1-201ENST00000216639 ZNF488Q96MN9 340 aa14.83□□□□□ -0.04
VRK1-201ENST00000216639 IFT22Q9H7X7 185 aa14.83□□□□□ -0.04
VRK1-201ENST00000216639 SPEF1Q9Y4P9 236 aa14.83□□□□□ -0.04
VRK1-201ENST00000216639 RFPL4AA6NLU0 287 aa14.82□□□□□ -0.04
VRK1-201ENST00000216639 RFPL4AL1F8VTS6 287 aa14.82□□□□□ -0.04
VRK1-201ENST00000216639 CD8AP01732 235 aa14.82□□□□□ -0.04
VRK1-201ENST00000216639 PI3P19957 117 aa14.82□□□□□ -0.04
VRK1-201ENST00000216639 GLRA1P23415 457 aa14.82□□□□□ -0.04
VRK1-201ENST00000216639 SEC61A1P61619 476 aaKnown RBP14.82□□□□□ -0.04
VRK1-201ENST00000216639 NAAAQ02083 359 aa14.82□□□□□ -0.04
VRK1-201ENST00000216639 MZT1Q08AG7 82 aa14.82□□□□□ -0.04
VRK1-201ENST00000216639 FIP1L1Q6UN15 594 aaKnown RBP14.82□□□□□ -0.04
VRK1-201ENST00000216639 CLEC18BQ6UXF7 455 aa14.82□□□□□ -0.04
VRK1-201ENST00000216639 DOLPP1Q86YN1 238 aa14.82□□□□□ -0.04
VRK1-201ENST00000216639 SUMF2Q8NBJ7 301 aa14.82□□□□□ -0.04
VRK1-201ENST00000216639 ELMOD3Q96FG2 381 aa14.82□□□□□ -0.04
VRK1-201ENST00000216639 WDR89Q96FK6 387 aaPredicted RBP14.82□□□□□ -0.04
VRK1-201ENST00000216639 WDR13Q9H1Z4 485 aa14.82□□□□□ -0.04
VRK1-201ENST00000216639 CXXC4Q9H2H0 198 aa14.82□□□□□ -0.04
VRK1-201ENST00000216639 IL36RNQ9UBH0 155 aa14.82□□□□□ -0.04
VRK1-201ENST00000216639 PTPRZ1P23471 2315 aaPredicted RBP14.82□□□□□ -0.04
VRK1-201ENST00000216639 FXYD6-FXYD2A0A087WZ82 144 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 KIR2DS1A0A191URI9 304 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 DBX1A6NMT0 343 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 FAM25EA8MYX2 175 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 M0R233 179 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 DEGS1O15121 323 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 NOS1APO75052 506 aaPredicted RBP14.81□□□□□ -0.04
VRK1-201ENST00000216639 NAPSAO96009 420 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 KNG1P01042 644 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 ZNF728P0DKX0 622 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 DUSP1P28562 367 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 KIR2DS4P43632 304 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 ZNF154Q13106 437 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 KIR2DS1Q14954 304 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 SLC9A3R2Q15599 337 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 GSG1LQ6UXU4 331 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 WDR86Q86TI4 376 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 OR8H1Q8NGG4 311 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 FXYD6Q9H0Q3 95 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 Q9N2K0 584 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 SLC23A1Q9UHI7 598 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 TINAGQ9UJW2 476 aa14.81□□□□□ -0.04
VRK1-201ENST00000216639 M0R1B8 84 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 CDIPTO14735 213 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 CRYAAP02489 173 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 GRPP07492 148 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 ACAA1P09110 424 aaPredicted RBP14.8□□□□□ -0.04
VRK1-201ENST00000216639 SSTR2P30874 369 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 FCGR2CP31995 323 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 FABP6P51161 128 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 ZNF83P51522 516 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 CYCSP99999 105 aaKnown RBP14.8□□□□□ -0.04
VRK1-201ENST00000216639 SORDQ00796 357 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 RBPJQ06330 500 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 RGS7BPQ6MZT1 257 aaPredicted RBP14.8□□□□□ -0.04
VRK1-201ENST00000216639 SGPP2Q8IWX5 399 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 DPCDQ9BVM2 203 aaPredicted RBP14.8□□□□□ -0.04
VRK1-201ENST00000216639 RAB18Q9NP72 206 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 LOC400499M0QZD8 3231 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 C5orf51A6NDU8 294 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 A8MXE2 369 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 EEF1E1-BLOC1S5C9J1V9 151 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 HSPB6O14558 160 aa14.8□□□□□ -0.04
VRK1-201ENST00000216639 CCSO14618 274 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms