RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 CRYABP02511 175 aaKnown RBP13.08□□□□□ -0.31
SPTLC2-201ENST00000216484 IER3P46695 156 aa13.08□□□□□ -0.31
SPTLC2-201ENST00000216484 DUSP8Q13202 625 aa13.08□□□□□ -0.31
SPTLC2-201ENST00000216484 SCD5Q86SK9 330 aa13.08□□□□□ -0.31
SPTLC2-201ENST00000216484 GABRG3Q99928 467 aa13.08□□□□□ -0.31
SPTLC2-201ENST00000216484 ACER3Q9NUN7 267 aa13.08□□□□□ -0.31
SPTLC2-201ENST00000216484 ELOA3CA0A087WX78 387 aaPredicted RBP13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 PTGESO14684 152 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 NGFP01138 241 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 ABHD17CQ6PCB6 329 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 C20orf196Q8IYI0 205 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 OR8I2Q8N0Y5 310 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 TMUB1Q9BVT8 246 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 ASCL3Q9NQ33 180 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 FAHD2BQ6P2I3 314 aaPredicted RBP13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 NUFIP2Q7Z417 695 aaKnown RBP13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 SLC17A2O00624 439 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 ZNF26P17031 533 aaPredicted RBP13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 LPAR6P43657 344 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 MPV17LQ2QL34 196 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 TREM2Q9NZC2 230 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 MIOXQ9UGB7 285 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 LIPGQ9Y5X9 500 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 GNG3P63215 75 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 MTURNQ8N3F0 131 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 IP6K3Q96PC2 410 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 HSPB2A8KAH6 182 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 GPX5O75715 221 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 JUNBP17275 347 aaPredicted RBP13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 FPR2P25090 351 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 PTGFRP43088 359 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 HSPB2Q16082 182 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 FAM27D1Q5T7N8 215 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 APOBEC3DQ96AK3 386 aaPredicted RBP13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 NTNG2Q96CW9 530 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 FOCADQ5VW36 1801 aa13.08□□□□□ -0.32
SPTLC2-201ENST00000216484 TMSB15BA0A087X1C1 80 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 SNURFLB1AK76 121 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 OR8D4Q8NGM9 314 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 IDSB3KWA1 339 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 TNFSF15O95150 251 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 TSPAN12O95859 305 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 HES3Q5TGS1 186 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 FAM53AQ6NSI3 398 aaPredicted RBP13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 ARHGAP5-AS1Q96IT6 56 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 IGHV3-43A0A0B4J1X8 118 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 IGHV3-43DP0DP04 118 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 ATF1P18846 271 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 GSG1Q2KHT4 349 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 KHDC3LQ587J8 217 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 PTRH1Q86Y79 214 aaKnown RBP13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 GBGT1Q8N5D6 347 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 ZNF646O15015 1829 aaPredicted RBP13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 SNED1Q8TER0 1413 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 SRSF10O75494 262 aaKnown RBP13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 CCR2P41597 374 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 OR2W5A6NFC9 320 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 MKRN2OSH3BPM6 223 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 PGA4P0DJD7 388 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 PGA5P0DJD9 388 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 SLC25A35Q3KQZ1 300 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 CA13Q8N1Q1 262 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 RFESDQ8TAC1 157 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 AQP10Q96PS8 301 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 SIRT5Q9NXA8 310 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 FUT3P21217 361 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 CEACAM3P40198 252 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 MRPL43Q8N983 215 aaKnown RBP13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 WDR13Q9H1Z4 485 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 KIR3DX1Q9H7L2 352 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 PRSS50Q9UI38 385 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 TRAV8-7A0A075B6U6 113 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 DLK1P80370 383 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 RFLNAQ6ZTI6 216 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 LAT2Q9GZY6 243 aa13.07□□□□□ -0.32
SPTLC2-201ENST00000216484 C9orf170A2RU37 121 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 CD22P20273 847 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 ANKRD34AQ69YU3 496 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 OR4P4Q8NGL7 312 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 CDX1P47902 265 aaPredicted RBP13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 SEZ6L2Q6UXD5 910 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 ADTRPQ96IZ2 230 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 SPNP16150 400 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 COL19A1Q14993 1142 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 ANKRD55Q3KP44 614 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 EAF1Q96JC9 268 aaPredicted RBP13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 COL25A1Q9BXS0 654 aaPredicted RBP13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 RAB1BQ9H0U4 201 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 IGKV3OR2-268A0A0C4DH90 116 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 B4DEV8 164 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 OR4A8P0C604 315 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 ROM1Q03395 351 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 PNRC1Q12796 327 aaPredicted RBP13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 SPATA45Q537H7 98 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 FAM169BQ8N8A8 192 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 ST8SIA1Q92185 356 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 PRRX2Q99811 253 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 PKDREJQ9NTG1 2253 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 F2RL2O00254 374 aa13.06□□□□□ -0.32
SPTLC2-201ENST00000216484 HLA-GP17693 338 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms