RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Gabrr1P56475 480 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Wfdc5Q4KXB6 126 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Foxf1Q61080 378 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Rpa2Q62193 270 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Btn1a1Q62556 524 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Usf2Q64705 346 aaKnown RBP13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Nol4lQ6DIB4 494 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Thap4Q6P3Z3 569 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr1385Q7TQT1 309 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Reep4Q8K072 257 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr1277Q8VF41 303 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr1008Q8VGC7 313 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Asb10Q91ZT7 467 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Slc31a2Q9CPU9 143 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Tmem88Q9D0N8 159 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Fzd2Q9JIP6 570 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 LitafQ9JLJ0 161 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 St6galnac5Q9QYJ1 336 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr914E9PW59 316 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Dcpp3L7N259 170 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Cd200O54901 278 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Il7rP16872 459 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Rps2P25444 293 aaKnown RBP13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Vmn1r236Q05A06 334 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Hoxc4Q08624 264 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 B4galnt1Q09200 533 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Cd300lbQ3U497 209 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Slc7a15Q50E62 488 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr1042Q7TR81 313 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr453Q7TRV7 317 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 NelfaQ8BG30 530 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Eddm3bQ8K0E4 149 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 B3gnt8Q8R3I9 389 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Rita1Q9D1H0 253 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 ChrdQ9Z0E2 948 aa13.13□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Trbv15A0A0A6YYE3 115 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Igkv17-127A0A0G2JDN5 117 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Esp16A8R0U9 85 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Ccl26F8VQM2 93 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Gm21818J3KMS6 170 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Vmn1r86L7N213 316 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Rnf133Q14B02 382 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Foxr2Q3UM89 302 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Cd55bQ61476 407 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Calm5Q6W3E0 140 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Mtch2Q791V5 303 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Eml2Q7TNG5 649 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Zfp954Q7TNU5 416 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Gpr135Q7TQP2 457 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr305Q7TS02 319 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Vash1Q8C1W1 375 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 4930451G09RikQ8C5G4 195 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Elfn1Q8C8T7 828 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Colec10Q8CF98 277 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Vmn1r28Q8R2C9 302 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr1100Q8VFM1 321 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr732Q8VFT5 308 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Ddit4lQ8VHZ5 193 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Rbmxl1Q91VM5 388 aaKnown RBP13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Sft2d3Q9CSV6 209 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Atp23Q9CWQ3 201 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Tspan32Q9JHH2 256 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Nckap5E9QAE1 1909 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Ighv16-1A0A0A6YW39 117 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Skint8A7XV07 398 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Vmn2r83E9Q0G7 864 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 GamtO35969 236 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 AF067061O70616 171 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Ntsr1O88319 424 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Slc6a18O88576 615 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 IfngP01580 155 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Gm9125P0DMR6 365 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 MgmtP26187 211 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 JPT1P97825 154 aaKnown RBP13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 RelbQ04863 558 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Psg19Q4KL31 475 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Nkain2Q4PNJ2 208 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Arg1Q61176 323 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Mrps26Q80ZS3 200 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Tm6sf2Q8R1J1 378 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Scrt1Q99M85 348 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Mcts2Q9CQ21 181 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Supt7lQ9CZV5 412 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 OxsmQ9D404 459 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 ManbalQ9D8X0 85 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Iqcf5Q9DAL7 148 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Zfp869Q9DC47 529 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 CalcrlQ9R1W5 463 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Mmp16Q9WTR0 607 aa13.12□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Irs2P81122 1321 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr1150-ps1A0A1L1STL1 316 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Zfp229E9PWT2 705 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr750E9Q0Z1 331 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Gm10881P01642 115 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Resp18P47939 175 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 FrzbP97401 323 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 TifaQ793I8 184 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Olfr988Q7TRA1 309 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Tmbim1Q8BJZ3 309 aa13.11□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 SccpdhQ8R127 429 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 93.4 ms