RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 RhouQ9EQT3 261 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Nek6Q9ES70 313 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Ep300B2RWS6 2412 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm14444A2ARW3 426 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Nipsnap1O55125 284 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Prss39O70169 367 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 P01655 112 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Pcgf2P23798 342 aaKnown RBP7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm648Q3UJ22 213 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm5447Q8BPB2 115 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Trank1Q8BV79 2999 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr168Q8VF05 312 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 GpnmbQ99P91 574 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Mrps30Q9D0G0 442 aaKnown RBP7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Stard10Q9JMD3 291 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Lama5Q61001 3718 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Obp2bA2BHR0 176 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm5478D3Z6R0 159 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm8281L7N235 204 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Ntf3P20181 258 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1428Q0VDY1 314 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr890Q7TRD9 314 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Rell2Q8BRJ3 303 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Ing4Q8C0D7 249 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Pxdc1Q8JZU6 231 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Scgb2b27Q8R1E9 112 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Prss28Q924N9 274 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Ranbp3Q9CT10 491 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 SdhcQ9CZB0 169 aaKnown RBP7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Syt9Q9R0N9 491 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 NbasE9Q411 2356 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm4881A0A140LIR9 352 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Lcn5A2AJB7 192 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Vmn2r124K7N789 855 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Mtnd4lP03903 98 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Cd8bP10300 213 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Itgb2P11835 771 aaKnown RBP7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Acp5Q05117 327 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr125Q14AJ9 320 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm10912Q3UXH0 145 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Nol4lQ6DIB4 494 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 G6pc3Q6NSQ9 346 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1181Q7TR18 311 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 NelfaQ8BG30 530 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Rab9bQ8BHH2 201 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Nedd4lQ8CFI0 1004 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 DhrsxQ8VBZ0 335 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1230Q8VG58 305 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Sfxn3Q91V61 321 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 NrarpQ91ZA8 114 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 C1galt1Q9JJ06 363 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Fzr1Q9R1K5 493 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Nprl2Q9WUE4 380 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Ubl3Q9Z2M6 117 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm26992S4R1A3 76 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr110A2RT31 317 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Pnliprp2P17892 482 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 GalnsQ571E4 520 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 2900092C05RikQ5I0V9 184 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Tcf15Q60756 195 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1111Q7TR55 312 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr111Q7TRK1 317 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Zfp955aQ80XR7 545 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 GldnQ8BMF8 549 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Exosc6Q8BTW3 273 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Vmn1r179Q8R2B4 323 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Q8R2K8 148 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1392Q8VFA6 311 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1110Q8VG38 312 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Uxs1Q91XL3 420 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Slco1a4Q9EP96 670 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Pard6gQ9JK84 382 aa7.54□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1564K7N6V7 318 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Map2k4P47809 397 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Npbwr1P49681 329 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 RelbQ04863 558 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1442Q0VEV7 312 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Dus4lQ32M08 324 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Zfp874bQ7M6X2 447 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Plcxd3Q8BLJ3 321 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Or51e2Q8VBV9 320 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr993Q8VF75 314 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1260Q8VGN9 310 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gtf3aQ8VHT7 364 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Cacng5Q8VHW4 275 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Thyn1Q91YJ3 226 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Zmat5Q9CQR5 170 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Sgo1Q9CXH7 517 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 ApooQ9DCZ4 198 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Copz2Q9JHH9 205 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 MvkQ9R008 395 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 S1pr3Q9Z0U9 378 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Ptprz1B9EKR1 2312 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Zfp69A2A761 587 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Zfp942B8JJA7 486 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 BC035044E0CXF8 138 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Psg20E9Q9B4 475 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm9493F6SVV1 192 aaKnown RBP7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm21783J3QM57 227 aa7.53□□□□□ -1.2
Trim39-201ENSMUST00000042717 Abcd4O89016 606 aa7.53□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms