RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Cd79aP11911 220 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Bmp8aP34821 399 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Cxcl5P50228 132 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Bmp8bP55105 399 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 NfybP63139 207 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 EbpP70245 230 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rps19bp1Q8C6B9 143 aaKnown RBP9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr837Q8VFJ4 312 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Mapk7Q9WVS8 806 aa9.24□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr267A2AM35 313 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ankrd60A2AMD2 318 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Nkx6-2D3Z4R4 277 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm17669F6QL70 154 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ankrd65F6YK91 380 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ccl22O88430 92 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 PtgirP43252 415 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Hsd17b8P50171 259 aaKnown RBP9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rab11aP62492 216 aaKnown RBP9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Thbs3Q05895 956 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 MestQ07646 335 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 LipnQ3U4B4 400 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gal3st2Q6XQH0 394 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Zfp273Q7M6W8 501 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Zfp85Q7TMC9 473 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 P4htmQ8BG58 503 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Nsun5Q8K4F6 465 aaKnown RBP9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Dmbx1Q91ZK4 381 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Mrps34Q9JIK9 218 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Cited4Q9WUL8 182 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Nup205A0A0J9YUD5 2061 aaKnown RBP9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Pappa2E9PZ87 1789 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tspoap1Q7TNF8 1846 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 2010106E10RikA2ANY3 279 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tmem74bA2AU34 232 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr66F8VQ01 311 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rac2Q05144 192 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 TigarQ8BZA9 269 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn1r66Q8K4I0 310 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1394Q8VET2 312 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr736Q8VFT6 312 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn1r56Q9EPS9 310 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 TollipQ9QZ06 274 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Arl16B1ATY8 173 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Arxes1C0HK79 180 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Arxes2C0HK80 180 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tex45G3XA23 500 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm20834J3QM72 227 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 MfngO09008 321 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ifna7P06799 190 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ly6fP35460 134 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rpl12P35979 165 aaKnown RBP9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rps23P62267 143 aaKnown RBP9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Slc7a10P63115 530 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 4930480E11RikQ0VG34 394 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Scarb1Q61009 509 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Klk8Q61955 260 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm13757Q7TR17 305 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr775Q7TRI4 312 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr452Q7TRV8 317 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Mospd3Q8BGG6 235 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Cd99l2Q8BIF0 237 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Vmn1r183Q8K3N5 305 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Chrnb4Q8R493 495 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr536Q8VFE9 307 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr38Q8VGP4 317 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Zcchc10Q9CX48 178 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Dtwd2Q9D0U1 298 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Pga5Q9D106 387 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Chchd2Q9D1L0 153 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Fzd2Q9JIP6 570 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 NagkQ9QZ08 343 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Mn1D3YWE6 1297 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr243E9PV96 316 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Cldn20G5E8X0 219 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Epha8O09127 1004 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 GzmaP11032 260 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 PlatP11214 559 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 ArsbP50429 534 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Bcl2l15Q08ED0 167 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Fam109bQ14B98 259 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tbrg1Q3UB74 406 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Taar8cQ5QD05 344 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Fbxw20Q5U467 468 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Fbxo27Q6DIA9 280 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr487Q7TRU9 314 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Lrrc3bQ8VCH9 259 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1451Q8VFX5 310 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Olfr1270Q8VGP3 304 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 CtsjQ9R014 334 aa9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Ice1E9Q286 2241 aaKnown RBP9.23□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 8030474K03RikE9Q4Y8 554 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Gm4788E9Q8B5 879 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 NodalP43021 354 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 AmbpQ07456 349 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Rpusd3Q14AI6 344 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Tex30Q3TUU5 225 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Wdr34Q5U4F6 535 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 Paqr7Q80ZE4 345 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 GhsrQ99P50 364 aa9.22□□□□□ -0.93
Ccdc40-201ENSMUST00000035935 5530401A14RikQ9D3H9 131 aa9.22□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms