RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	HIST1H2BA	Q96A08	127 aa		11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	ISOC2	Q96AB3	205 aa		11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	SPSB1	Q96BD6	273 aa		11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	MSI2	Q96DH6	328 aa	Known RBP	11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	GALNT14	Q96FL9	552 aa		11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	IMMP1L	Q96LU5	166 aa		11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	C20orf24	Q9BUV8	137 aa		11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	EGLN1	Q9GZT9	426 aa		11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	CRLF2	Q9HC73	371 aa		11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	FAM212B	Q9NTI7	297 aa	Predicted RBP	11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	NSG2	Q9Y328	171 aa		11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	RFNG	Q9Y644	331 aa		11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021		A0A087WZY1	265 aa		11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	IGHV1-45	A0A0A0MS14	117 aa		11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	TERT	O14746	1132 aa	Known RBP	11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	EPHA8	P29322	1005 aa	Predicted RBP	11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	SUCLG1	P53597	346 aa	Known RBP	11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	DSCR4	P56555	118 aa	Predicted RBP	11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	SPEM1	Q8N4L4	309 aa		11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	FGFBP3	Q8TAT2	258 aa		11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	C18orf12	Q96KH6	178 aa		11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	MRPS17	Q9Y2R5	130 aa	Known RBP	11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	POMT1	Q9Y6A1	747 aa		11.99	□□□□□ -0.49
PHGDH-233	ENST00000642021	SNRNP70	P08621	437 aa	Known RBP	11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021	ZNF44	P15621	663 aa		11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021	RBP2	P50120	134 aa		11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021	GUK1	Q16774	197 aa		11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021	HPSE2	Q8WWQ2	592 aa		11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021	LOC102723996	A0A087X1L8	192 aa		11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021	ACAA1	P09110	424 aa	Predicted RBP	11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021	B4GALT1	P15291	398 aa		11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021	ZNF32	P17041	273 aa		11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021	DTYMK	P23919	212 aa		11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021	AWAT1	Q58HT5	328 aa		11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021	LIAT1	Q6ZQX7	453 aa		11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021	HSD17B11	Q8NBQ5	300 aa		11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021	OR1F12	Q8NHA8	337 aa		11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021	BORCS8	Q96FH0	119 aa		11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021	WNT5B	Q9H1J7	359 aa		11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021	DKKL1	Q9UK85	242 aa		11.98	□□□□□ -0.49
PHGDH-233	ENST00000642021		A0A1B0GV50	99 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021		A0A1W2PPE3	182 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	C7orf77	A4D0Y5	90 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021		H7C1Q1	480 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021		K7ESF4	209 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	SEC11B	P0C7V7	166 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	COX6A1	P12074	109 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	FOLR2	P14207	255 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	CBR1	P16152	277 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	DAZAP2	Q15038	168 aa	Predicted RBP	11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	ASCL4	Q6XD76	172 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	GINS3	Q9BRX5	216 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	ST3GAL6	Q9Y274	331 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	KPTN	Q9Y664	436 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	TRBV23-1	A0A0A0MS06	115 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	KLF7	O75840	302 aa	Predicted RBP	11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	NRAS	P01111	189 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	P2RY1	P47900	373 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	UCP2	P55851	309 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	RAC1	P63000	192 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	RAB35	Q15286	201 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	C15orf54	Q8N8G6	183 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	LRTM2	Q8N967	370 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	SAP25	Q8TEE9	199 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	TP53RK	Q96S44	253 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	EIF5A2	Q9GZV4	153 aa	Known RBP	11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	SPACA1	Q9HBV2	294 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	SH2D2A	Q9NP31	389 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	PTRH2	Q9Y3E5	179 aa	Known RBP	11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	HS3ST3B1	Q9Y662	390 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021	PI4KA	P42356	2102 aa		11.97	□□□□□ -0.49
PHGDH-233	ENST00000642021		A0A0G2JMM0	328 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021		A0A1W2PPB8	328 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021		A0A1W2PRS3	328 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	KIR3DP1	A8MWS1	328 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	ZNHIT1	O43257	154 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	GPR137B	O60478	399 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	STARD6	P59095	220 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	ZNF92	Q03936	586 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	TMEM42	Q69YG0	159 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	FBXW12	Q6X9E4	464 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	RBMS3	Q6XE24	437 aa	Known RBP	11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	YRDC	Q86U90	279 aa	Known RBP	11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	OSR2	Q8N2R0	312 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	GSN-AS1	Q9NRJ2	163 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	P4HTM	Q9NXG6	502 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	PHF1	O43189	567 aa	Predicted RBP	11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	PTAFR	P25105	342 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	CAMLG	P49069	296 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	PSG4	Q00888	419 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	CNN3	Q15417	329 aa	Known RBP	11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	GPR137C	Q8N3F9	429 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	NANP	Q8TBE9	248 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	NTNG2	Q96CW9	530 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	DUSP23	Q9BVJ7	150 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021	SUCNR1	Q9BXA5	334 aa		11.96	□□□□□ -0.49
PHGDH-233	ENST00000642021		A6NLC8	198 aa		11.96	□□□□□ -0.5
PHGDH-233	ENST00000642021	IFNA4	P05014	189 aa		11.96	□□□□□ -0.5
PHGDH-233	ENST00000642021	AADAC	P22760	399 aa		11.96	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms